Nocardioides sp. Arc9.136: OSR43_13100
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Entry
OSR43_13100 CDS
T10603
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr02020
Two-component system
nocr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OSR43_13100
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OSR43_13100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocr03021
]
OSR43_13100
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nocr02035
]
OSR43_13100
Transcription machinery [BR:
nocr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OSR43_13100
Bacterial motility proteins [BR:
nocr02035
]
Flagellar system
Flagellar assembly proteins
Stator
OSR43_13100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
Motif
Other DBs
NCBI-ProteinID:
WKN46974
LinkDB
All DBs
Position
2703199..2704071
Genome browser
AA seq
290 aa
AA seq
DB search
MTSHHEAGHDGRDGDAPAEDLVRCHLPLVTHLVNATMGRVPSFVNRDDLRSAGLEALVRA
SRGFDPTAGVPFGAYATARVRGGILDELRSLDWAPRSVRQRSREVETARERLAVQLGRLP
EPAQVAEALGIGVQDLARHEGDVARSQVASLEAGQVAPLVDQVPATSPSPEASAETGERL
RYLEAAIAELPARLRRVVEGYFLEERPMADLARELSVTESRISQMRAQALSLICHALHPV
LTPERVTTAAGPADGVAARRRDAYAASVLAREAAGRSTAAHGAAHLPRVV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgacgagccatcacgaggcagggcacgacggacgcgacggggacgcacccgccgaggac
ctggtccggtgccacctgcccctggtgacccacctggtgaacgcgacgatggggcgggtc
ccgtccttcgtcaaccgcgacgacctccggtccgccgggctcgaggcgctcgtgcgcgcc
tcccgggggttcgaccccacggccggggtgccgttcggcgcctacgccaccgcccgggtc
cgcggaggcatcctggacgagctccgctcgctggactgggcgccccgctcggtgcggcag
cgcagccgggaggtcgagaccgcccgggagcggctggccgtccagctgggtcggctgccg
gagccggcgcaggtcgccgaggcgctcggcatcggggtgcaggacctggcccgccacgag
ggcgacgtcgcccgctcgcaggtcgcctccctggaggcgggccaggtggcgcccctggtc
gaccaggtgcccgccaccagcccgtcgccggaggccagcgccgagaccggcgagcggctg
cgctacctcgaggcggcgatcgccgagctccccgcccgcctgcgccgggtggtcgagggc
tacttcctcgaggagcggccgatggccgacctggcgcgcgagctgagcgtcaccgagtcc
cggatctcgcagatgcgggcgcaggccctgtccctcatctgccacgcgctgcacccggtc
ctcaccccggagcgcgtcaccaccgcggccgggcccgccgacggcgtcgccgcccggcgg
cgggacgcgtacgccgcgagcgtgctcgcccgcgaggcggccggccggagcacggccgcc
catggggccgcgcacctgccgcgcgtcgtctga
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