Nocardioides sp. Arc9.136: OSR43_15820
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Entry
OSR43_15820 CDS
T10603
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03420
Nucleotide excision repair
nocr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OSR43_15820
03430 Mismatch repair
OSR43_15820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_15820
Enzymes [BR:
nocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSR43_15820
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSR43_15820
MMR (mismatch excision repair)
Other MMR factors
OSR43_15820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WKN47495
LinkDB
All DBs
Position
complement(3257905..3261195)
Genome browser
AA seq
1096 aa
AA seq
DB search
MTSTMPDRTAVPAREISTPEQLRELMGVDWTFSDQQFAAVTAPLEPAVVIAGAGSGKTTV
MAARVVWLVATGRVAPGEILGLTFTTKATAELQTRIRESLRQAGLLPERGTRAPGPDGEE
QEVEEPTVATYHSYASALLSEHGLRIGHEPDTRLVADASRFQLAARAVQRYAAPVEQLTD
SPRHVVQYLLALDAEMSEHLVGPADVRAHDERLRPLLVDGMATEHRKTYRALNEKAVAAI
DKRAELLGLVEAYRALKRHHGLMDFSDQIALAARLAEERPEVGEAERAKYRIVLLDEYQD
TSVAQALMLRRLFSGPEPGAGRGHPVMAVGDPNQAIYGWRGASVSNILEFTREFPTADGA
PGTTYPLTVNRRSDARILATANHLAEELYASRPDLLPLEAKPGADPGEVRAVVHETWDDE
LAWLGDRVLETHAALSATTDGPCWKEIGVLTRDNAHAAAVFDALSEREVPVEIVGLKGLL
RLPEVSEVVATLTLVQDVTANAALLTLLAGPRWAIGPRDLALLGRRARELAGDTSGGATF
TDVREQLAAAVEGADPTEIASLCDALEDPGDLEYSPEARERFALLATELRRLRGALGEPI
LDLVRRIVDTTGIDVELASSVSPAAAARRDNLDLFVQAVAEFQAVDGQVTLPALLAWLEA
EDEFGQGLDVATPSEADSVKLLTVHRAKGLEWDAVFLVGVTERKFPTNRTRSSWLTVPFV
MPTALRGDARDLPQLAGHGPEDIKALGEAVKAHEALEELRLGYVAWTRARHQMWVSAWRW
APHLKSGLGPSAYLCATREAMATWGAEPDRWADCVAKGETNPYADASPDLPWPISHRTAE
VERRIEAARRVREADPVTPAELEGGFDDRIEDVLELERVQQWDDEIARLLEEARRDRSPH
VEVELPSSLSATSLARLRDDPEELARDLARPMPRRPSSAARFGTRFHAWVETRFGQQLLL
DPDELPGRADLDIDDDADLQELVARFEEGPFAERVPHAVEPSFALVVEGQVVRGRIDAVY
REDTEEGEGYLVVDWKTGRSGEADPLQLAIYRQAWAELHDLPVERVRAAFYFVRSGRVVE
PAGLPDRQELAALLRL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaccatgcccgaccggaccgcggtgccggcccgcgagatctcgacgccggag
cagctgcgcgagctgatgggtgtcgactggaccttcagcgaccagcagttcgccgcggtc
accgctcccttggagccggccgtcgtgatcgcgggtgcggggtccggcaagacgacggtg
atggcagcccgggtcgtctggctggtggccaccggccgcgtggcgcccggcgagatcctc
ggcctcacgttcaccaccaaggcgaccgccgagctgcagacgcggatccgcgagagcctg
cgccaggccggcctcctgcccgagcgcggcacccgcgcccccgggccggacggggaggag
caggaggtcgaggagccgaccgtcgcgacgtaccactcctacgcctcggcgctgctctcc
gagcacggcctgcgcatcggccacgagcccgacacccgtctggtcgccgacgccagccgc
ttccagctggcggcccgcgccgtgcagcggtacgcggctccggtcgagcagctgaccgac
tccccgcgccacgtcgtccagtacctcctcgcgctcgacgcggagatgagcgagcacctc
gtgggccccgccgacgtccgggcccacgacgagcggctgcgcccgctgctggtcgacggc
atggccaccgagcaccgcaagacctaccgcgcgctgaacgagaaggccgtcgccgcgatc
gacaagcgggccgagctcctcgggctggtcgaggcctaccgcgccctcaagcggcaccac
gggctgatggacttctccgaccagatcgccctggccgcccggctggccgaggagcggccg
gaggtgggggaggccgagcgggcgaagtaccggatcgtcctgctcgacgagtaccaggac
acctcggtcgcccaggcgctgatgctgcgccggctcttctccgggcccgagccgggggcc
ggtcgcggccacccggtgatggcggtcggcgacccgaaccaggcgatctacgggtggcgc
ggcgcgtcggtctcgaacatcctcgagttcacccgcgagttcccgacggcggacggcgcc
cccggcacgacgtacccgctcacggtcaaccgccgctccgacgcccgcatcctcgccacc
gccaaccacctggccgaggagctgtacgccagccggcccgacctgctgccgctcgaggcc
aagccgggcgccgacccgggcgaggtccgagcggtcgtgcacgagacgtgggacgacgag
ctggcctggctgggggaccgggtgctcgagacccacgccgcgctgtcggcgaccaccgac
ggtccgtgctggaaggagatcggggtcctcacccgcgacaacgcccacgccgcagccgtc
ttcgacgcgctgagcgagcgggaggtcccggtcgagatcgtgggtctcaagggcctgctc
cgcctgcccgaggtctcggaggtggtcgcgacgctgaccctggtccaggacgtgacggcc
aacgccgcgctgctgaccctcctggcggggccgcgctgggcgatcgggccgcgcgacctc
gcgctgctcggccggcgggcccgggagctcgccggcgacacctcgggcggggcgacgttc
accgacgtccgcgagcagctggccgccgccgtcgagggcgccgaccccaccgagatcgcc
tccctgtgcgacgcgctggaggacccgggcgacctggagtactcacccgaggcgcgcgag
cggttcgcgctgctcgccaccgagctgcgccggctccgcggagcgctcggcgagccgatc
ctcgacctggtgcgacgcatcgtcgacacgaccggcatcgacgtcgagctggcctcctcg
gtcagccccgccgccgccgcgcgccgcgacaacctcgacctgttcgtccaggcggtggcg
gagttccaggccgtcgacggccaggtcacgctgccggcactgctcgcgtggctcgaggcg
gaggacgagttcggccagggcctcgacgtggcgacaccgtcggaggccgactcggtcaag
ctgctgacggtgcaccgcgccaagggcctggagtgggacgcggtgttcctcgtcggggtg
acggagcggaagttcccgaccaaccggacccggtcgagctggctgaccgtgccgttcgtg
atgccgaccgcgctgcgcggcgacgcccgcgacctgccgcagctggccggccacggcccc
gaggacatcaaggcgctgggcgaggcggtcaaggcccacgaggcgctcgaggagctccgg
ctcgggtacgtcgcctggacccgcgcccgtcaccagatgtgggtctcggcctggcgctgg
gcgccgcacctcaagagcggcctcgggccctcggcgtacctctgcgccacccgtgaggcc
atggcgacctggggcgccgagccggaccggtgggccgactgcgtcgcgaagggcgagacc
aacccctacgccgacgcctcgcccgacctgccgtggcccatctcgcaccgcaccgccgag
gtcgagcggcggatcgaggcggcgcgccgggtgcgagaggctgacccggtgaccccggcc
gagctggagggcggcttcgacgaccggatcgaggacgtcctggagctcgagcgcgtccag
cagtgggacgacgagatcgcccgcctgctcgaggaggcccggcgggaccgctcaccccac
gtcgaggtcgagctgcccagcagcctctcggcgacctcgctggcccggctccgggacgac
cccgaggagctggcccgcgacctggcccggccgatgccgcgacggccgtcgtcggcggca
cgcttcggcacccggttccacgcctgggtggagacccggttcggccagcagctgctcctc
gaccccgacgagctgccgggccgtgccgacctcgacatcgacgacgacgcggacctgcag
gagctggtcgcgcgcttcgaggagggccccttcgcggagcgggtcccgcacgcggtcgag
ccgtccttcgcgctggtcgtcgagggacaggtggtccggggccgcatcgacgccgtctac
cgcgaggacaccgaggagggggagggctacctcgtcgtggactggaagaccggccgctcc
ggcgaggccgacccgctccagctcgcgatctaccgccaggcgtgggccgagctgcacgac
ctcccggtcgagcgggtgcgggctgccttctacttcgtgcgcagcggccgcgtcgtcgag
ccggccgggctgccggaccgtcaggagctggcggcgctgctgcggctctga
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