Nocardioides sp. Arc9.136: OSR43_17180
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Entry
OSR43_17180 CDS
T10603
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr00020
Citrate cycle (TCA cycle)
nocr00640
Propanoate metabolism
nocr00660
C5-Branched dibasic acid metabolism
nocr00720
Other carbon fixation pathways
nocr01100
Metabolic pathways
nocr01110
Biosynthesis of secondary metabolites
nocr01120
Microbial metabolism in diverse environments
nocr01200
Carbon metabolism
Module
nocr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nocr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OSR43_17180 (sucD)
00640 Propanoate metabolism
OSR43_17180 (sucD)
00660 C5-Branched dibasic acid metabolism
OSR43_17180 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
OSR43_17180 (sucD)
Enzymes [BR:
nocr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OSR43_17180 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
DapB_N
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WKN47759
LinkDB
All DBs
Position
complement(3547841..3548722)
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AA seq
293 aa
AA seq
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MTIYLNKDSKIIVQGITGGMGSKHTNLMLQADSNIVGGVNARKAGTTVELNGKELPVFGT
VKEAMEATGADVSVAFVPPAFTKDACIEAIDAEIPLLVVITEGVPVQDSAEVFAYLDGKK
TRMIGPNCPGIISPEESLAGITPHTIAGKGPVGLVSKSGTLTYQMMYELRDFGFSTAIGI
GGDPIIGTTHIDALEAFENDPETKAIVMIGEIGGDAEERAAAYIKDHVTKPVVGYVAGFT
APEGKTMGHAGAIVSGSSGTAQAKKEALEAVGVKVGKTPSETAALMREILQSL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacgatctacctcaacaaggactccaagatcatcgtccagggcatcacgggcgggatg
ggctccaagcacaccaacctgatgctccaggccgactcgaacatcgtgggcggtgtcaac
gcccgcaaggccggcaccaccgtcgagctcaacggcaaggagctgccggtcttcgggacc
gtcaaggaggccatggaggccaccggcgccgacgtctcggtcgccttcgttcccccggcc
ttcaccaaggacgcctgcatcgaggccatcgacgcggagatcccgctgctggtggtcatc
accgagggtgtcccggtccaggacagcgccgaggtcttcgcctacctcgacggcaagaag
acccggatgatcggccccaactgccccgggatcatctccccggaggagtcgctggccggc
atcaccccgcacaccatcgcgggcaagggtccggtcggcctcgtgtcgaagtcgggcacg
ctgacctaccagatgatgtacgagctgcgggacttcggcttctccaccgccatcggcatc
ggtggtgacccgatcatcggcaccacgcacatcgacgcgctcgaggccttcgagaacgac
ccggagaccaaggccatcgtgatgatcggcgagatcggcggcgacgccgaggagcgggcc
gcggcgtacatcaaggaccacgtcaccaagccggtcgtcggctacgtcgcgggcttcacc
gcccccgagggcaagacgatgggccacgccggcgcgatcgtgtcgggctcctccggcacc
gcgcaggccaagaaggaggccctcgaggccgtcggcgtcaaggtcggcaagacgccgtcc
gagaccgcggcgctcatgcgggagatcctccagtcgctctga
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