Nocardioides sp. Arc9.136: OSR43_20715
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Entry
OSR43_20715 CDS
T10603
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03018
RNA degradation
Brite
Enzymes [BR:
nocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OSR43_20715
Messenger RNA biogenesis [BR:
nocr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OSR43_20715
Ribosome biogenesis [BR:
nocr03009
]
Prokaryotic type
rRNA helicases
OSR43_20715
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Other DBs
NCBI-ProteinID:
WKN48433
LinkDB
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Position
complement(4290331..4292046)
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AA seq
571 aa
AA seq
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MSTTEDAPAPTTTFADLGLDDSVLRALKDVGYETPSPIQAATIPPLLEGRDVVGLAQTGT
GKTAAFALPILSKLDLKQKTPQALVLAPTRELALQVCEAFERYAAHRKGVHVLPVYGGQA
YGVQLSALRRGVHVVVGTPGRIMDHLDKGTLDLSELRFLVLDEADEMLNMGFAEDVETIL
ASTPEDKNVALFSATMPAQIRRLSKSYLRDPQEITVKASSTTAANITQRYLLVSYPQKVD
ALTRILEVENFEGMIVFVRTKHETETLAEKLRARGFSAAAINGDVAQAVRERTVNQLKSG
KLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRTGDAISFVTPRER
YLLKHIEKATRQPLTQMPLPNVDDVNATRLSRFDDAITEALGQTDRIEKFRDIIGHYVKE
YDVPEVDVAAALAVVAQGDTPLLLDPKAEVRPPRVDDRPERKDRGDRPDRGERKPRGRTD
VPMATYRINVGKRHKVEPRQIVGAIANEGGLQRGDFGHIQIRPDFSLVELPADLSPTVFQ
KLEETRISGKLIELQPDNGPARPARKPRHKG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccaccgaagacgcccctgcccccacgaccaccttcgcggacctgggcctcgac
gactccgtgctgcgcgccctcaaggacgtcggctacgagacgccgtcgcccatccaggcc
gccaccatccccccgctgctcgagggtcgcgacgtcgtcggcctggcgcagaccggcacc
ggcaagaccgccgccttcgcgctgccgatcctcagcaagctggacctgaagcagaagacg
ccgcaggcgctggtgctcgcccccacgcgtgagctcgcgctccaggtgtgcgaggccttc
gagcggtacgccgcgcaccgcaagggcgtgcacgtgctccccgtctacggcggccaggcg
tacggcgtccagctctccgcgctccgccgcggcgtccacgtggtcgtgggcacccccggc
cggatcatggaccacctcgacaagggcaccctcgacctgtccgagctgcgcttcctggtg
ctcgacgaggccgacgagatgctcaacatgggcttcgccgaggacgtcgagacgatcctc
gcgagcacgcccgaggacaagaacgtcgcgctgttctccgcgacgatgcccgcgcagatc
cgccggctctccaagagctacctgcgcgacccgcaggagatcaccgtcaaggcgagctcc
acgaccgccgcgaacatcacccagcgctacctgctggtcagctacccgcagaaggtcgac
gccctcacgcgcatcctagaggtcgagaacttcgaggggatgatcgtcttcgtccgcacc
aagcacgagaccgagacgctcgccgagaagctgcgcgcccggggcttctccgccgctgcg
atcaacggcgacgtcgcgcaggcggtccgcgagcggaccgtcaaccagctgaagtcgggc
aagctcgacatcctcgtcgccaccgacgtcgcggcccgcggcctcgacgtcgagcggatc
agccacgtcgtcaactacgacatccccaccgacaccgagtcctacgtccaccgcatcggc
cgcaccggccgcgcgggccggaccggcgacgcgatctcgttcgtgaccccgcgcgagcgc
tacctgctcaagcacatcgagaaggcgacccggcagccgctgacccagatgccgctgccg
aacgtcgacgacgtcaacgccacccggctctcccgcttcgacgacgcgatcaccgaggcg
ctgggccagaccgaccggatcgagaagttccgcgacatcatcgggcactacgtcaaggag
tacgacgtgcctgaggtcgacgtggccgccgcgctcgccgtcgtggcgcagggcgacacc
ccgctgctgctcgaccccaaggccgaggtgcgcccgccgcgcgtcgacgaccgtcccgag
cgcaaggaccggggcgaccgtcccgaccgcggcgagcgcaagccgcgcgggcgcaccgac
gtcccgatggcgacgtaccggatcaacgtcggcaagcggcacaaggtcgagccgcgccag
atcgtcggcgcgatcgccaacgagggcggcctccagcgcggggacttcgggcacatccag
atccgcccggacttctccctcgtcgagctgccggcggacctgtcgccgaccgtcttccag
aagctcgaggagacccggatctccggcaagctcatcgagctccagcccgacaacggcccg
gcccgcccggcccgcaagccgcgccacaagggctga
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