Nocardioides sp. WV_118_6: ABFU82_02025
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Entry
ABFU82_02025 CDS
T10638
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU82_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_02025
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABFU82_02025
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFU82_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XBB68107
LinkDB
All DBs
Position
431009..431743
Genome browser
AA seq
244 aa
AA seq
DB search
MSGPAEAMARLDDQVSRCRRCPRLVAWREQVARDKRAAYADQDYWGRPVPGFGPADARIL
LVGLAPAAHGANRTGRMFTGDRAGDWLFASLHRVGLANQAASVALDDGLELHEVRMAAPI
RCAPPANKPTPEERAACAPWLDRELAILRPSLRVAVALGAIGWQSALTALGGAGWTVPRP
RPRPRFGHGAEALLGWAGRGAGADVVLLGCFHPSQHNTFTGRLTEPMTDEVLLRAREVAE
TMTR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacccgcggaggcgatggcgcggctggacgaccaggtcagccggtgccgccgc
tgcccgcggctggtcgcctggcgcgagcaggtcgcgcgggacaagcgcgcggcgtacgcc
gaccaggactactggggccgcccggtgcccggcttcggcccggccgacgcccggatcctc
ctggtcgggctcgcccccgccgcccacggggccaaccgcacgggccggatgttcaccggc
gaccgggccggcgactggctgttcgcgtccctgcaccgggtcggcctggccaaccaggcc
gcgagcgtggcgctcgacgacggcctcgagctgcacgaggtccggatggccgcgccgatc
cgctgcgcgccgccggccaacaagcccacccccgaggagcgggccgcctgcgcgccctgg
ctcgaccgcgagctggcgatcctgcggccctcgctgcgcgtggccgtcgcgctcggggcc
atcggctggcagtcggcgctcaccgcgctcggtggcgcgggctggaccgtgccccggccg
cggccgcggccacggttcgggcacggcgccgaggcactgctgggctgggccggtcgcggc
gccggagcggacgtcgtcctcctcggctgcttccaccccagccagcacaacacgttcacc
ggacggctcaccgagccgatgaccgacgaggtgctgctgcgggcgcgagaggtcgctgag
acaatgacccggtga
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integrated database retrieval system
