Nocardioides sp. WV_118_6: ABFU82_03475
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Entry
ABFU82_03475 CDS
T10638
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00300
Lysine biosynthesis
nocw00470
D-Amino acid metabolism
nocw01100
Metabolic pathways
nocw01110
Biosynthesis of secondary metabolites
nocw01120
Microbial metabolism in diverse environments
nocw01230
Biosynthesis of amino acids
Module
nocw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABFU82_03475 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABFU82_03475 (lysA)
Enzymes [BR:
nocw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABFU82_03475 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XBB68386
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Position
747592..748986
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AA seq
464 aa
AA seq
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MTHEAGWAHAPGALRGPAWLQAPADVNTLVPQLWSATAHKTKSGDLVVGGLPIADLVAEH
NTPAYVLDEDDFRGRARAFRDAFADYDVYYAGKAFLSVAVARWVAEEGLHLDVCSAGELT
VALRAGVEPARIGYHGNNKTVAELRRAVSAGVGRIIVDSFQEVERLAMVAADTGLPARAM
VRVTAGVEAHTHEYIATAHEDQKFGFSITSGDAFDAVRRLHEAPGVELLGLHSHIGSQIF
DSAGFEVAARRVLGLHARVATELGAVMPEMDLGGGFGIAYTTQDDPREPAQLAAELTAIV
DHECRALDVARPRLSIEPGRAIVGPAMCTVYTVGTVKQVTLDAGAVRTYVSVDGGMSDNI
RTALYDADYSCTLAGRRSEATPVLARVVGKHCEAGDIVVRDEFLPGDIAPGDLLAVPGTG
AYCRSMASNYNHALRPPVIAVKDGVARVIVRRETEDDLLATDLG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgaggccggctgggcgcacgcgcccggcgccctgcgcggacctgcctggctc
caggcgcccgccgacgtcaacaccctggtgccgcagctgtggtcggcgaccgcgcacaag
accaagagcggcgacctggtcgtcggcggactgccgatcgcggacctggtcgccgagcac
aacaccccggcgtacgtcctcgacgaggacgacttccggggccgggcgcgcgccttccgc
gacgccttcgccgactacgacgtctactacgccggcaaggcgttcctctccgtcgcggtc
gcccgctgggtcgccgaggagggtctgcacctcgacgtgtgctcggccggtgagctgacc
gtcgcgctgcgcgcgggcgtcgagccggcccggatcggctaccacggcaacaacaagacc
gtcgccgagctgcgccgtgcggtctccgccggggtcgggcggatcatcgtcgactccttc
caggaggtcgagcggctcgcgatggtcgccgccgacaccgggctcccggcgcgcgccatg
gtccgggtgaccgccggcgtcgaggcgcacacccacgagtacatcgcgaccgcccacgag
gaccagaagttcggcttctcgatcacctccggcgacgccttcgacgccgtacgacgcctc
cacgaggcccccggcgtcgagctgctcggcctgcactcccacatcggcagccagatcttc
gactccgccggcttcgaggtcgcggcccgccgcgtcctcggcctgcacgcccgcgtggcc
accgagctcggcgcggtcatgcccgagatggacctcggcggcggcttcggcatcgcctac
acgacccaggacgacccgcgcgagcccgcccagctcgccgccgagctcaccgcgatcgtc
gaccacgagtgccgcgccctcgacgtcgcccgcccgcggctctcgatcgagcccggccgc
gcgatcgtcggcccggcgatgtgcaccgtctacaccgtcggcacggtcaagcaggtcacc
ctcgacgccggcgccgtgcgcacctacgtcagcgtcgacggcgggatgagcgacaacatc
cgcaccgcgctctacgacgccgactactcctgcaccctggccggccgccgctccgaggcc
accccggtgctcgcccgcgtcgtcggcaagcactgcgaggccggcgacatcgtcgtgcgc
gacgagttcctgcccggcgacatcgcccccggcgacctgctcgccgtgcccggcaccggc
gcctactgccgctcgatggcctccaactacaaccacgccctgcgcccgccggtgatcgcg
gtcaaggacggcgtcgcgcgcgtcatcgtgcgccgcgagaccgaggacgacctgctcgcc
acggacctcggctga
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