Nocardioides sp. WV_118_6: ABFU82_03605
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Entry
ABFU82_03605 CDS
T10638
Name
(GenBank) DEAD/DEAH box helicase
Organism
nocw Nocardioides sp. WV_118_6
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
SWIM
Motif
Other DBs
NCBI-ProteinID:
XBB68410
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All DBs
Position
complement(772810..776010)
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AA seq
1066 aa
AA seq
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MNVLATLTDEFLGRHFDPATLDRAREVAAAGAVRRPEIGQLTASSVTATAEVQGSRDLPY
QVQLHAEAPTDDYAGWLFTVCTCPVRSTCKHGAALALTLRQTFTQPAGEATWRRSLERLV
TELDKQQAGPVEQVPLALEISLEEGRTSYRSVGPAIRIRPMRQGKNKPWIKTGADWSDIG
LGSGAAGFPPEQADAIAALHALWSGHRSYYYAGVAPSLDEFGDHVVRALRHARDAGVTLL
PARPLRSVAIADEPAEVVAELTDVDGGTTLRAAVTLGERTWRGDAVVPIGSPASVVGLVE
DRHLVLAATTAPVPPALRHLVDGPPIVVPPADLAAFRSALPGLMRHLPVRAEESAVELPE
PLAPTLVLTVTWHSATKAGLAWHWQYGDDGRDGGEARTCSLTSHDPLGGVRDRAAEHAIL
ETVSPGLLTTATMADGDALALAIHGLPRLRTLAGVRVVEQERPDFREADIAPEIRFDLVE
PADADAAGATDWLDLAVTVSVDGEQIPLPDVLAALTLDQEFLVLPSGLYVTTDRPELARL
REVVDAAAELRERDGEHIGIGHHDLGLWAQLAETGLVDTQVAEWVHRAHALRDLTDIPQP
TPRGLVTDLRSYQREGFWWLAFLWQHGLGGILADDMGLGKTLQVLALIAHARTERPTDAP
FLVVAPTSVVTAWASEAARHAPGLRVGIAGRRTDDVAALARDHDIVVTTYTLLRLAHERY
AGVAWSGVVLDEAQQAKNHQSKTYQAVRTIEAPFKLAVTGTPFENRLMELWSLLSITVPG
LYPWPRAFADKVVRPVERDADAAVLDRFRARIKPFLLRRTKELVADDLPPKQEQVLEVDL
DPKHRKIYDTHLAKERQRILGLVEDFDRNRVAIFSALTKLRQLALDPALVDAEHDKVGSA
KLDVLVDHLAEITAEGHRALVFSQFTSFLGRVRARLDAADIVTTYLDGSTRDRGAVIDEF
RSGAAPVFLISLKAGGVGLTLTEADYVFVLDPWWNPAAEAQAVDRAHRIGQTAHVHVYRL
VATDTIEEKVMELKARKAELFAQVIDGDGAMSTAIGADDIRGLFAD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcctcgccacgctgaccgacgagttcctgggccgccacttcgacccggccacg
ctcgaccgcgcccgcgaggtggccgcggcgggcgccgtacggcgtcccgagatcggtcag
ctgaccgcctcctcggtgaccgccaccgccgaggtgcagggctcgcgcgacctgccctac
caggtccagctgcacgccgaggcgcccaccgacgactacgccggctggctgttcacggtg
tgcacctgcccggtccgctcgacctgcaagcacggcgccgcgctggcgctgacgctgcgc
cagacgttcacccagcccgccggcgaggccacctggcggcgctcgctcgagcggctggtg
accgagctcgacaagcagcaggccggtccggtcgagcaggtgccgctcgcgctcgagatc
agcctcgaggaggggcgcaccagctatcgctcggtcggcccggcgatccggatccggccg
atgcgccagggcaagaacaagccgtggatcaagaccggcgccgactggagcgacatcggg
ctcgggtccggcgcggccggcttcccgcccgagcaggccgacgcgatcgccgcgctgcac
gcgctgtggtcgggtcaccgctcctactactacgcgggggtcgcgccctcgctcgacgag
ttcggcgaccacgtggtgcgggcgctgcgccacgcccgcgacgccggcgtgacgctgctg
ccggcgcggccgctgcgctcggtcgccatcgccgacgagcccgccgaggtcgtcgccgag
ctcaccgacgtcgacggcgggacgacgctgcgcgcggccgtcactctcggcgagcggacc
tggcgcggcgacgccgtcgtaccgatcgggtcgccggcgtcggtggtcggcctggtcgag
gaccgccacctcgtcctcgccgcgaccaccgcgcccgtgccgcccgcgctgcgccacctc
gtcgacgggccgccgatcgtcgtaccgccggcggacctggcggcgttccgctcggccctg
ccggggctgatgcgccacctgccggtgcgcgccgaggagtccgcggtcgagctgcccgag
ccgctcgcgcccacgctggtgctcaccgtgacctggcacagcgcgaccaaggcggggctc
gcctggcactggcagtacggcgacgacggtcgcgacggcggggaggcgcgcacctgctcg
ctgaccagccacgacccgctcggcggcgtgcgcgaccgggcggccgagcacgcgatcctc
gagaccgtctcccccggcctgctcaccaccgccacgatggccgacggcgacgccctggcg
ctcgcgatccacggtctgccgcgcctgcgcacgctggccggggtacgggtggtcgagcag
gagcggcccgacttccgcgaggccgacatcgcgcccgagatccgcttcgacctggtcgag
cccgccgacgccgacgcggccggcgccaccgactggctcgacctcgcggtcaccgtcagc
gtcgacggtgagcagatccccctgcccgacgtgctcgccgcgctcaccctcgaccaggag
ttcctggtgctgccgagcgggctctacgtcaccaccgaccgccccgagctcgcccggctg
cgcgaggtcgtcgacgccgccgccgagctgcgcgagcgcgacggcgagcacatcggcatc
ggccaccacgacctcggcctgtgggcccagctcgccgagaccggcctggtcgacacccag
gtcgccgagtgggtccaccgcgcccacgcgctgcgcgacctcaccgacatcccccagccc
accccgcgcggcctggtcaccgacctgcgcagctaccagcgcgagggcttctggtggctg
gcgttcctgtggcagcacgggctcggcgggatcctcgccgacgacatgggcctgggcaag
accctccaggtcctcgccctcatcgcccacgcccgcaccgaacggcccaccgacgcgccc
ttcctcgtcgtcgcccccaccagcgtggtgaccgcctgggcctccgaggccgcccggcac
gcgcccgggctgcgcgtcggcatcgccggacgccgtacggacgacgtggcggcgctcgcc
cgcgaccacgacatcgtggtcaccacctacacgctgctccggctcgcccacgagcgctac
gccggcgtcgcgtggtcgggcgtcgtcctcgacgaggcccagcaggccaaaaaccaccag
agcaagacctaccaggcggtgcgcaccatcgaggcgccgttcaagctcgccgtcaccggc
acgcccttcgagaaccggctgatggagctgtggtcgctcctctcgatcaccgtccccggc
ctctacccgtggccgcgcgccttcgccgacaaggtcgtccggcccgtcgagcgcgacgcc
gacgccgccgtcctcgaccgcttccgggcccggatcaagccgttcctgctgcggcgtacc
aaggagctcgtcgccgacgacctgccgcccaagcaggagcaggtcctcgaggtcgacctc
gaccccaagcaccgcaagatctacgacacccacctggccaaggagcgccagcggatcctc
ggcctggtcgaggacttcgaccgcaaccgggtcgccatcttcagcgccctgaccaagctc
cgccagctcgccctcgaccccgccctggtcgacgccgagcacgacaaggtcggctcggcc
aagctcgatgtcctcgtcgaccacctcgccgagatcaccgccgagggccaccgcgccctc
gtgttcagccagttcacctcgttcctgggccgggtccgcgcccgcctcgacgcggccgac
atcgtcacgacgtacctcgacgggtccacccgcgaccgcggcgccgtcatcgacgagttc
cgctccggcgccgcccccgtcttcctgatctccctcaaggccggcggcgtcggcctcacc
ctcaccgaggccgactacgtcttcgtcctcgacccgtggtggaaccccgccgccgaggcc
caggccgtcgaccgcgcccaccggatcggccagaccgcccacgtccacgtctaccgcctc
gtcgccaccgacacgatcgaggagaaggtcatggagctcaaggcgcgcaaggccgagctg
ttcgcccaggtgatcgacggcgacggtgcgatgagcaccgcgatcggggccgacgacatc
cggggactgttcgccgactga
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