Nocardioides sp. WV_118_6: ABFU82_03880
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Entry
ABFU82_03880 CDS
T10638
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocw03016
]
ABFU82_03880 (truB)
Enzymes [BR:
nocw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABFU82_03880 (truB)
Transfer RNA biogenesis [BR:
nocw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABFU82_03880 (truB)
Prokaryotic type
ABFU82_03880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
MST
DKCLD
TP0873_N
Motif
Other DBs
NCBI-ProteinID:
XBB68461
LinkDB
All DBs
Position
826658..827527
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AA seq
289 aa
AA seq
DB search
MTSSGAPSGLVVVDKPGGMTSHAVVSRVRRTLGTRKVGHAGTLDPMATGVLVLGVERATR
LLGHLMLTEKTYSATVRLGQVTTTDDAEGETTATIPTAHVTEDAVRTALAAFEGEISQVP
STVSAIKVDGKRAYARARAGEEVELKARPVTIHEITAGGFRREGDFLDLEIRVRCSSGTY
IRAIARDLGAALGVGGHLTALRRHAVGPFTLATACTDLDDLQVTPLADAARATFPAVDLD
AEQAQAVRYGRPLPLVIDELTGVFDPAGEFLALYKPEGATARPAAVFVG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcgtccggcgcgccgtccgggctggtcgtcgtcgacaagcccggcggcatgacg
tcgcacgccgtcgtctcccgggtacgacgcacgctcggcacccgcaaggtcgggcacgcc
ggcaccctcgacccgatggcgaccggcgtgctcgtgctgggcgtcgagcgagcgacccgg
ctgctcggtcacctcatgctgaccgagaagacctactccgcgaccgtccggctcggccag
gtcaccacgaccgacgacgccgagggcgagaccaccgcgaccatcccgaccgcgcacgtc
accgaggacgccgtgcggaccgcgctcgccgcgttcgagggcgagatctctcaggtgccc
tcgaccgtctccgcgatcaaggtcgacggcaagcgcgcttacgcccgggcccgggctggc
gaggaggtcgagctcaaggcccggccggtgacgatccacgagatcaccgccggcgggttc
cgccgcgagggcgacttccttgacctggagatccgggtgcgctgctccagcggcacctac
atccgcgcgatcgcccgtgacctgggtgcggcgctgggcgtgggcggtcacctgacggcg
ctgcgccggcacgccgtcggccccttcacgctcgccaccgcctgcaccgacctcgacgac
ctccaggtcaccccgctcgccgacgccgcccgggcgaccttccccgccgtcgacctggac
gccgagcaggcccaggcggtgcgctacggacggccgctgccgctggtgatcgacgagctg
accggcgtcttcgacccggccggtgagttcctcgcgctctacaagcccgagggcgccacc
gcccggcccgcggcggtcttcgtcgggtga
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