Nocardioides sp. WV_118_6: ABFU82_04990
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Entry
ABFU82_04990 CDS
T10638
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABFU82_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocw03021
]
ABFU82_04990
Transcription machinery [BR:
nocw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABFU82_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
FBF1
Motif
Other DBs
NCBI-ProteinID:
XBB68675
LinkDB
All DBs
Position
complement(1056545..1057534)
Genome browser
AA seq
329 aa
AA seq
DB search
MATTTMTRPTSTKRNTGREIEGRDSVGLYLDEIARTPLLDAAREVELAKTIEAGLFAEHL
LAQGRVGRKKGGAPKQASEAELEWIAEEGRKAVTEFINANLRLVVSIARKYGRAQMPMLD
LIQEGNTGLIRAVEKFDYAKGYKFSTYATWWVRQAITRGIAQQARVVRLPVHVVEELNQV
GGARRTLERQLGRDPEPAEIAQELGMEVERVLDLMAWGREHVSLDTPVDEDGDTSLGDLM
AQETAPGPDLTVLDVESRDRLNSLVDQLDPRAADIIRSRYGLTDGRQHKLADIGVKHGIS
AERVRQLEREALQKLRRLGDPDLASGSAA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacgacgatgactcggccgacgagcaccaagcggaacaccggacgcgagatc
gagggacgcgacagcgtcggtctctacctcgacgagatcgcccgcaccccgctgctcgac
gcggctcgcgaggtcgagctggcgaagacgatcgaggccggcctgttcgccgagcacctc
ctcgcccagggccgcgtcggccgcaagaagggcggcgcccccaagcaggcctccgaggcc
gagctggagtggatcgccgaggagggccgcaaggccgtcacggagttcatcaacgccaac
ctgcgcctcgtggtctccatcgcccgcaagtacggccgggcccagatgccgatgctggac
ctgatccaggagggcaacacgggcctgatccgcgcggtcgagaagttcgactacgccaag
ggctacaagttctccacctacgccacctggtgggtgcgccaggcgatcacccgcggcatc
gcgcagcaggcgcgcgtcgtacggctgccggtgcacgtggtcgaggagctcaaccaggtc
ggcggcgcccgtcgtaccctcgagcgccagctgggccgcgaccccgagcccgccgagatc
gcccaggagctcggcatggaggtcgagcgggtgctcgacctgatggcctggggccgcgag
cacgtgagcctcgacaccccggtcgacgaggacggcgacacctccctcggtgacctgatg
gcccaggagaccgcgccgggccccgacctgaccgtcctcgacgtcgagtcccgcgaccgg
ctcaacagcctcgtcgaccagctcgacccgcgcgcggccgacatcatccgctcccgctac
ggcctcaccgacggccgccagcacaagctcgccgacatcggcgtcaagcacggcatctcc
gccgagcgggtacgccagctcgagcgcgaggcgctgcagaagctgcgccgcctcggcgac
ccggacctggcgtccggctcggccgcctga
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