Nocardioides sp. WV_118_6: ABFU82_06490
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Entry
ABFU82_06490 CDS
T10638
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nocw03051
]
ABFU82_06490 (pafA)
Enzymes [BR:
nocw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
ABFU82_06490 (pafA)
Proteasome [BR:
nocw03051
]
Prokaryotic proteasome
Bacterial regulatory particles
ABFU82_06490 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
XBB68956
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Position
1354035..1355396
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVTELVTHDKAGERVLEGLLLDAEQRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRAGEFSRLADVLIPFLVTRQIIVGAGKVTQTPRGTSYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREIAHDVTGRRKVRLANGREASALEIQGEYLAKARDFVDRRGISTPVI
ERSLDLWERGLKAVESDDLSLVDREIDWVIKWKLIDRYRAKHGLPMSHPRVAQLDLAYHD
IHRNRGLYYLLEKRGAVARVSTDLKIFEAKSVPPQNTRARLRGEFIRRAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAYDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcggatcttcgggatcgagaacgaatacggggtcacctgcacgttccgcggc
cagcgccggctcagtcccgacgaggtcgcgcgctacctgttccgcaaggtcgtgagctgg
ggtcgctccagcaacgtcttcctgcgcaacggcgcccggctctacctcgacgtcggcagc
cacccggagtacgccacccccgagtgcgacgacgtcaccgagctcgtcacgcacgacaag
gcgggggagcgggtgctcgaggggctgctgctcgacgccgagcagcggttgcacgacgag
ggcatcgcgggcgagatctacctgttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaactacctggtcagccgggccggtgagttcagccggctcgccgacgtg
ctcatcccgttcctggtgacccgccagatcatcgtgggcgccggcaaggtgacccagacg
ccgcgggggaccagctactcggtcagccagcgcgccgagcacatctgggagggcgtctcc
agcgcgaccacccggagccggccgatcatcaacacccgcgacgagccgcacgcggacgcc
gagaagtaccgccggctccacgtcatcgtcggcgactccaacatgagcgagacgaccacc
atgctcaaggtcgcctcctgcgacctggtgctgcggatgatcgaggagggcgtggtgatg
cgcgacctcacgatggagaaccccatccgggccatccgcgagatcgcgcacgacgtcacc
gggcggcgcaaggtgcgcctggccaacgggcgcgaggcgagcgcgctggagatccagggc
gagtacctcgccaaggcccgcgacttcgtcgaccgccgtgggatcagcacgccggtcatc
gagcgctcgctcgacctttgggagcggggcctcaaggcggtcgagtccgacgacctcagc
ctggtcgaccgcgagatcgactgggtgatcaagtggaagctcatcgatcgctaccgcgcc
aagcacgggctgccgatgagccacccgcgcgtggcccagctcgacctggcctaccacgac
atccaccgcaaccgcgggctctactacctgctcgagaagcgcggggcggtcgcccgggtc
tccaccgacctcaagatcttcgaggccaagtcggtcccgccccagaacacccgggcccgg
ctgcgcggcgagttcatccgtcgcgcccaggagcggcgccgggacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcacggtgctctgcaaggacccgttccgg
gcgtacgacgagcgcgtgcagcgactcatcgacggcatgtga
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