Nocardioides sp. WV_118_6: ABFU82_08110
Help
Entry
ABFU82_08110 CDS
T10638
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00260
Glycine, serine and threonine metabolism
nocw00460
Cyanoamino acid metabolism
nocw00630
Glyoxylate and dicarboxylate metabolism
nocw00670
One carbon pool by folate
nocw00680
Methane metabolism
nocw01100
Metabolic pathways
nocw01110
Biosynthesis of secondary metabolites
nocw01120
Microbial metabolism in diverse environments
nocw01200
Carbon metabolism
nocw01230
Biosynthesis of amino acids
nocw01240
Biosynthesis of cofactors
nocw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABFU82_08110
09102 Energy metabolism
00680 Methane metabolism
ABFU82_08110
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABFU82_08110
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABFU82_08110
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABFU82_08110
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABFU82_08110
Enzymes [BR:
nocw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABFU82_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
XBB69257
LinkDB
All DBs
Position
complement(1663269..1664720)
Genome browser
AA seq
483 aa
AA seq
DB search
MSDNSLNGGLVSSAYNQALEVIASVEPRIADATRQELADQRASLKLIASENYASPAVLLT
MGTWFSDKYAEGTVGHRFYAGCQNVDTVESLAAQHARELFGAEYAYVQPHSGIDANLTAY
WAILAHRVEGPWLEDAGVKNMNDLSEADWEKLRGALGNQRLLGMSLDAGGHLTHGFRPNI
SGKMFHQNQYGTDPATGLVDYDALRAKAKEFKPLILVAGYSAYPRRVNFAKMREIADEVG
ATLMVDMAHFAGLVAGKVFTGDEDPVPHAHVVTSTSHKSLRGPRGGFILATEEYAPSVDR
GCPMVLGGPLSHVMAAKAVAFAEARTPEFQTYAQNIADNAKSLAEGLMKRGTKLVTDGTD
NHIVLLDVSSFGLTGRQAESALLDAGVVTNRNSVPADPNGAWYTSGIRVGTPALTSRGFG
AAEFDVVADLIVEVLQNTQAGTTSAGAPSKASYVLGDGVADKVRAASAELLDKHPLYPGL
DLA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaactccctcaacggcggcctcgtcagcagcgcctacaaccaggccctcgag
gtcatcgcctccgtcgagccccgcatcgccgacgccacccgccaggagctcgccgaccag
cgggcgtcgctcaagctgatcgcgagcgagaactacgcctcgcccgcggtgctcctcacc
atgggcacctggttcagcgacaagtacgccgagggcaccgtcgggcaccgcttctacgcc
ggctgccagaacgtcgacaccgtcgagtcgctggccgcccagcacgcgcgcgagctgttc
ggcgccgagtacgcctacgtccagccgcactcgggcatcgacgccaacctgacggcgtac
tgggcgatcctggcgcaccgcgtcgagggtccctggctcgaggacgccggcgtcaagaac
atgaacgacctctccgaggccgactgggagaagctgcgcggcgcgctcggcaaccagcgc
ctgctcggcatgagcctcgacgcgggcggtcacctgacccacggcttccgccccaacatc
agcggcaagatgttccaccagaaccagtacggcaccgacccggccaccgggctcgtcgac
tacgacgcgctgcgggccaaggccaaggagttcaagccgctcatcctggtcgccggctac
tcggcctacccgcgccgggtgaacttcgccaagatgcgcgagatcgccgacgaggtcggc
gccaccctcatggtcgacatggcccacttcgccggcctggtcgccggcaaggtgttcacc
ggcgacgaggacccggtcccgcacgcccacgtggtcacctcgacctcgcacaagtcgctg
cgcggcccgcgcggcggcttcatcctggccaccgaggagtacgccccgagcgtcgaccgc
ggctgcccgatggtcctcggcggcccgctctcgcacgtgatggccgccaaggccgtcgcg
ttcgccgaggcgcggaccccggagttccagacctacgcccagaacatcgccgacaacgcg
aagtcgctggccgagggcctgatgaagcgcggcaccaagctcgtcaccgacggcaccgac
aaccacatcgtgctgctcgacgtgtcctccttcgggctgaccggtcgccaggccgagtcg
gcgctgctcgacgcgggcgtggtcaccaaccgcaactcggtcccggccgaccccaacggc
gcctggtacacctccggcatccgggtcggcacgccggcgctcaccagccgcggcttcggt
gcggccgagttcgacgtggtggccgacctcatcgtcgaggtcctgcagaacacccaggcc
gggacgacgtccgcgggcgcgccgtccaaggcgtcctacgtgctgggcgacggcgtggcc
gacaaggtccgggcggcctcggccgagctgctcgacaagcacccgctctacccgggtctc
gacctggcctga
DBGET
integrated database retrieval system
