Nocardioides sp. WV_118_6: ABFU82_08345
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Entry
ABFU82_08345 CDS
T10638
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nocw03009
]
ABFU82_08345 (rimO)
Enzymes [BR:
nocw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABFU82_08345 (rimO)
Ribosome biogenesis [BR:
nocw03009
]
Prokaryotic type
ribosomal protein modification factors
ABFU82_08345 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XBB69301
LinkDB
All DBs
Position
complement(1716909..1718354)
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AA seq
481 aa
AA seq
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MTSSPTNPVSVALLTLGCARNDVDSEELAGRLAADGFTLVDDPEDADTVVVNTCGFVDAA
KKDSIDTLLAAADLKESGRTQAVVAVGCLAERYGEELADSLPEADAVLGFDDYQDISGRL
RSILAGEKPHPHTPRDRRLLLPISPAERQAAVATLTPEDVDIAIPGRSAIRRRLDGGPMA
PLKLASGCDRRCTFCAIPMFRGSFVSRRPSDVLLEAVWLAEQGVKELFLVSENSTSYGKD
LGDLGLLETLLPELAAVDGIERVRVSYLQPAETRPGLVRAIATTPGVAPYFDLSFQHASA
TVLRRMRRFGDPESFLGLLDQVRTLAPEAGVRSNVIVGFPGETDEEFQTLCDFLVAARMD
VTGVFGYSDEDGTEAESFDGKLDEDEIRARVQHVTDLVGELTAQRAEERIGSTVEVLVEE
VDPDQTGDGTVEGRAALQGPEVDGTTRVLGVPGARVGDLVRAVVVASDGVDLIAEPAGDQ
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctctcccacgaaccccgtctcggtcgccctgctcaccctgggctgcgcccgc
aacgacgtcgactccgaagagctggccggccgcctcgcggccgacggcttcaccctcgtc
gacgaccccgaggacgccgacaccgtggtggtcaacacctgcggcttcgtcgacgcggcc
aagaaggactcgatcgacacgctgctcgccgccgcggacctcaaggagtccggccggacc
caggcggtcgtcgcggtgggctgcctcgccgagcggtacggcgaggagctggccgactcg
ctgcccgaggccgacgcggtgctcggcttcgacgactaccaggacatctccgggcggctg
cgctcgatcctggccggtgagaagccgcacccgcacaccccgcgcgaccggcgcctgctg
ctcccgatcagcccggccgagcgccaggccgccgtcgcgaccctgacccccgaggacgtc
gacatcgcgatccccgggcgctccgcgatccggcgccgcctcgacggcgggccgatggct
ccgctcaagctggccagcgggtgcgaccggcgctgcacgttctgcgccatcccgatgttc
cgtggctccttcgtcagccgccggccctccgacgtgctgctcgaggcggtctggttggcc
gagcagggcgtcaaggagctgttcctggtctcggagaactccacgtcctacggcaaggac
ctcggcgacctcggtctgctcgagaccctgctgcccgagctggccgccgtcgacggcatc
gagcgggtccgggtctcctacctgcagcccgccgagacccggccgggcctggtccgggcg
atcgcgacgacgcccggcgtggcgccgtacttcgacctgtcgttccagcacgccagcgcg
accgtgctgcgccggatgcgccgcttcggcgacccggagagcttcctcggcctgctcgac
caggtccgcacgctggcccccgaggccggcgtccgctccaacgtcatcgtcggcttcccc
ggagagaccgacgaggagttccagacgctgtgcgacttcctcgtcgccgcacggatggac
gtgaccggcgtcttcggctactccgacgaggacggcaccgaggcggagtccttcgacggc
aagctcgacgaggatgagatccgcgcccgggtccagcacgtcaccgacctggtcggcgag
ctgaccgcccagcgcgccgaggagcggatcggcagcaccgtcgaggtgctcgtcgaggag
gtcgacccggaccagaccggtgacggcaccgtcgagggccgcgccgcgctccagggcccc
gaggtcgacggtacgacgcgcgtcctcggcgtccccggcgcccgggtgggcgacctcgtc
cgcgctgtcgtcgtcgcctccgacggcgtcgacctgatcgccgagccggcaggagaccag
cgatga
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