Nocardioides sp. WV_118_6: ABFU82_10270
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Entry
ABFU82_10270 CDS
T10638
Name
(GenBank) Ig-like domain-containing protein
Organism
nocw Nocardioides sp. WV_118_6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
XBB69667
LinkDB
All DBs
Position
complement(2127684..2133767)
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AA seq
2027 aa
AA seq
DB search
MTHATKSVAWIGVAVLGLTMVPADAAPAEPLARRGACTIVGTSGNDVLVGTPRRDVICGF
GGNDRIDGRGGDDVIRGGDGDDIINGGPGNDLIWGGAGNDVIRGGDGNDRIRGGGGNDVL
YGGRGNDGLRGGAGDDRLYGGPGIDRLWGKAGHDVLSGGPGRDGLSCGTGGDKVVGGKGD
NVGKDCGPRKPDPDPEPEPGPGDPFAVDDSFATDEDTVLELPATGPGSPVANDTDPDDDV
LTVTAVGTATGGTVVLAGGTIRFTPTPDLCGPTAGGFAYTVSDGTGRSATGRVVVAITCV
DDDPVAADDTATVAEDSAASPVDVLANDTDADDDLVIGAVTQPDHGTVVLASGGTGLTYA
PDANYCNSGAGDDPDTFTYELTPGGSTATVRMTVTCVDDAPVAVDDTVTVGEHAPWTDLD
VLANDTDVDGGPKEVTGVTLPSHGEVAIAPGGTGVRYRPDLTAVCVAPATVSDTFTYVVN
SGSVATVSVTITCVTDAATAADDTATVTEDDPATAIDVLGNDDARDETLSIGSVTQPDHG
TVVITGGGTGLTYVPDADYCNSQPGGTRDTFTYTLTPGNATATVRVAVTCVVDPLEVNDD
TATVTEDDPATAIDVLANDGDPEGGTLSITAVTQPDHGTVLITGGGTGLTYRPDADYCNS
QSGGSPDTFTYTVNDGPTATVRVTVTCVTDAATAADDTATVTEDDPATAIDVLDNDDARD
ETLSIGSVTQPDHGTVVITSGGTGLTYEPDADYCNSQPGGARDTFTYTLTPSGATATVRV
AVTCVVDPLMLNDDTATVTEDDAATTIPVLANDTDPEGGLLAVTAVTQPANGTVVITGGG
TALTYRPAANYCNNQPGGTPDTFTYTVNGGPTATVRVTVACVYDPPTANADAATVDEDAS
TTVPVTANDIAGDDPAVVQSVTQPLHGSVSIVPGGLAVSYLPNPNYCNTPSGPTDDFTYT
LGGGSTATVKMTVTCVNDAPTAAPQSFTGVSAAVGNTALVVAPTGGGTPTTTGARKTVVG
NLLTGAADVDSGTLTVLAETVTSTGGGTAVLKADGGFVYHPPAGCTATTDTFTYRVSDGY
APTPGTGSAVVTVNLAGCVWYVSNDASGNAGTSDAPFDTLAQAATASKANDTIYVSAGTG
DTTGYADGIVLKNGQRLLGESRTLVIGGVTLADGVPGARPRLAATGTDVVSLASGNTVAG
FALDPAGVSSGIAGGTGDASGTVTDVRVTDTGAAGTAPGVVLDGTSGTFDLTDLVVDNTA
ASGPTSGSIGLKLRAAGTVKLSGQNRLLVTGAPAFTSDSTALQGSQIDRVLVTGSATGGV
NLLNSTGAVTLGKIELETTAGSTAALRLQNTGAITTTDATSTITATGGPAVEINDAPASQ
LELATVSSAHSASRGISITGLTSGSFKANGGTVSDHTTTAFYVDGGNGTVTYAGAINDGV
GGSVEVRGRSGGTVTASGTITDSTDIGGGVLVTGNTGGNTVLSGAGSTVRSGAADGIVLS
SSSGHTLTLSGGGLQVASTSGKGVDAAGGGTLNVTGTGNRIASTTGRALGVANTQIGSGN
LVLESVSSNGAPNGIRLVATGTAGSLRVTGAGGTCTPGSTAGCTGGEIANSTGSSPSGDA
PDGTGVVLSDTQAPSLTRMWIHGAGNYALRGDRTRGLTFAESVVNGLNGDADTDSAVVLT
ELSGTASIARTHLSGGYSDTLRVTNTTGDLGRLTVDTVTFGLNGNRPQNDALQLDASGAA
GDFPVTVTASTFQGAAGDQLQYGNAATKRGDLVVTDNVFTNTHPAISAGGGGVTVTEGGT
TSLDATVTGNQLTGAVGPGFLFAKAPGSGVQRGTFANNRIGTAGVDSSGSLSASGLKLQN
LGGGGIVWGVTGNQVRGYNTYGVEVVAGGGGGAQSGAVQTTVTGNVIAQPGTASATLGIP
KQGLHYNIGTTAGDTFEACADIQNNTLTGSGADGNPATGMNVDVRLRQRQLTTFRLPGYA
GANNGNAAVESFLATRNVAGATVRAENSVASGGGGYVGAGLSCPAVP
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgcgacgaagtcggtcgcgtggatcggggtcgccgtgctcggcctcacgatg
gtgcccgcggacgcggctccggcggagccgctcgcgcgccgcggtgcctgcacgatcgtg
ggtacgtccggcaacgacgtcctggtcggcaccccgcgccgcgacgtgatctgcggcttc
ggcggcaacgaccggatcgacggccgcggcggcgacgacgtgatccgcggcggcgacggc
gacgacatcatcaacggcggccccggcaacgacctgatctggggcggcgcgggcaatgac
gtgatccggggcggggacggcaacgaccggatccgcggcggcggcggcaatgacgtcctc
tacggcggccgcggcaacgacggcctgcgcggcggcgccggcgacgaccggctctacggc
ggtcccggcatcgaccggctctggggcaaggccgggcacgacgtgctctccggcggcccg
ggccgtgacgggctcagctgcggcaccggcggcgacaaggtcgtcggcggcaagggcgac
aacgtcggcaaggactgcggtccgcgcaagccggaccccgaccccgagcccgagccgggc
ccgggcgacccgttcgcggtcgacgactccttcgccaccgacgaggacacggtcctcgag
ctgccggccaccggcccgggcagcccggtcgccaacgacaccgaccccgacgacgacgtc
ctgaccgtcaccgcggtcggcacggccacgggtggcaccgtcgtgctggcgggcggcacc
atccggttcacgccgacccccgacctgtgcggtcccaccgccggcggcttcgcctacacg
gtctccgacggcaccgggcgcagcgccaccggtcgcgtcgtcgtcgccatcacctgcgtg
gacgacgacccggtcgccgccgacgacaccgccaccgtcgccgaggacagcgccgcgagc
ccggtcgacgtgctggccaacgacaccgatgccgacgacgacctggtcatcggcgcggtc
acccagcccgaccacggcaccgtggtgctcgcgagcggcgggaccgggctgacctacgcg
cccgacgcgaactactgcaactccggcgccggcgacgacccggacacgttcacctacgag
ctcaccccgggcgggtccaccgcgacggtgcggatgaccgtgacctgcgtggacgacgcc
cccgtcgcggtcgacgacaccgtcacggtcggcgagcacgccccctggaccgacctggac
gtcctggccaacgacaccgacgtcgacggcggccccaaggaggtcaccggggtcaccctg
ccgagccacggcgaggtcgccatcgccccgggcggcacgggggtgcgctaccgcccggac
ctgaccgcggtgtgcgtcgcgcccgccacggtgagcgacaccttcacctacgtggtcaac
agcggctccgtcgcgacggtcagcgtcacgatcacctgcgtcacggacgccgcgaccgcg
gccgacgacaccgccacggtgaccgaggacgacccggcgaccgcgatcgacgtcctgggc
aacgacgacgcgcgtgacgagacgctgtcgatcggctcggtcacccagcccgaccacggc
acggtggtgatcaccggcggcggcaccggcctgacctacgtgcccgacgcggactactgc
aacagccagccgggcggcacccgcgacacgttcacctacacgctcacgccgggcaacgcg
acggccaccgtgcgcgtcgcggtgacctgcgtcgtggacccgctcgaggtcaacgacgac
accgccacggtgaccgaggacgacccggccaccgcgatcgacgtcctcgccaacgacggc
gaccccgagggtgggacgctgtcgatcaccgcggtcacccagccggaccacggcacggtc
ctgatcaccgggggcggcaccggcctgacctaccggcccgacgcggactactgcaacagc
cagtccggcggttcgcccgacaccttcacctacaccgtcaacgacggtcccaccgcgacc
gtgcgggtcaccgtgacctgcgtgacggacgccgccaccgcggccgacgacaccgccacg
gtgaccgaggacgacccggccaccgcgatcgacgtcctcgacaacgacgacgcgcgtgac
gagacgctgtcgatcggctcggtcacccagcccgaccacggcacggtcgtgatcaccagc
ggcggcaccggcctgacctacgagcccgacgcggactactgcaacagccagccgggcggt
gcccgcgacacgttcacctacacgctcaccccgagtggggcgacggcgaccgtgcgcgtc
gcggtgacctgcgtcgtggatccgctcatgctcaacgacgacaccgcgacggtgaccgag
gatgacgcggccaccacgatcccggtcctcgccaacgacaccgaccccgagggcggcctc
ctggcggtcaccgcggtgacccagccggccaacggcaccgtcgtgatcaccggcggtggc
acggcgctgacctaccggccggccgcgaactactgcaacaaccagcccggcggcacgccc
gacaccttcacctacaccgtcaacggcggtcccaccgcgaccgtgcgggtcacggtggcg
tgcgtctacgacccgccgaccgcgaatgcggacgcggccacggtcgacgaggacgcctcg
accaccgtgccggtcaccgccaacgacatcgcgggcgacgacccggcggtggtgcagtcg
gtgacccagccgctccacgggtccgtctcgatcgtcccgggcggcctcgcggtgagctac
ctgccgaacccgaactactgcaacaccccgagcggtccgaccgacgacttcacctacacg
ctcggcggcggctccaccgcgaccgtgaagatgacggtcacctgcgtgaacgacgcgccc
acggcagcaccccagtccttcaccggcgtctccgccgcggtcggcaacaccgccctcgtc
gtcgccccgaccggcggcggtacgccgaccacgaccggcgcgcgcaagacggtggtgggc
aacctgctcaccggcgcggccgacgtcgacagcggcacgctcaccgtgctcgccgagacg
gtgaccagcaccggcggcggtaccgcggtcctgaaggccgacggcggcttcgtctaccac
ccgccggccgggtgcacggcgaccaccgacaccttcacctaccgggtgagcgacgggtac
gcccccacgccgggtacgggcagcgccgtcgtcacggtcaacctcgccggctgcgtctgg
tacgtctccaacgacgcctccggcaacgcgggcacctccgacgcgcccttcgacacgctc
gcgcaggccgcgaccgcctcgaaggccaacgacacgatctacgtctccgcgggcaccggt
gacacaaccggctacgccgacggcatcgtgctcaagaacggtcagcggctcctgggcgag
tcccgcaccctggtcatcggcggcgtgacgctcgccgacggcgtccccggggcacggccc
cggctcgccgccaccggtaccgacgtggtcagcctcgccagcggcaacaccgtggccggc
ttcgccctcgacccggccggcgtcagcagcggcatcgccggcgggacgggcgacgcgagc
ggcaccgtcaccgacgtccgggtcaccgacaccggcgcggccggtacggcgcccggcgtc
gtgctcgacggcacctccggcacgttcgacctcaccgacctcgtcgtggacaacaccgcc
gcgagcggtcccacgagcggctcgatcggcctcaagctccgcgccgcgggcacggtcaag
ctcagcggccagaaccgcctcctcgtcacgggcgccccggcgttcacctccgacagcacg
gcgctccagggcagccagatcgaccgggtgctcgtgaccggctcggcgacggggggtgtg
aacctgctcaacagcaccggtgcggtcacgctcggcaagatcgagctcgagaccaccgcc
ggctcgaccgccgcgctgcgcctgcagaacaccggggcgatcaccacgaccgacgcgacc
agcacgatcaccgccaccggcggtcccgcggtcgagatcaacgacgccccggcctcgcag
ctcgagctcgccacggtctcctcggcccacagcgcgagccgcggcatctcgatcaccggg
ctcaccagcggcagcttcaaggccaacggcggcaccgtgagcgaccacaccaccaccgcc
ttctacgtcgacggcggcaacggcaccgtcacctacgccggggcgatcaacgacggcgtg
ggcggctcggtcgaggtccgcggacggagcggcggcacggtcaccgcgtccggcacgatc
accgactccaccgacatcggcggcggcgtgctggtcaccggcaacacgggcggcaacacc
gtcctgagcggcgcgggctccaccgtccggtccggtgccgccgacggcatcgtgctgtcg
tccagctccggccacaccctcaccctcagcgggggcggcctgcaggtggcgagcaccagc
ggcaagggcgtcgacgcggccggcggtggcaccctgaacgtcaccgggaccggcaaccgg
atcgcctccacgaccggacgcgcgctcggcgtggcgaacacccagatcggcagcggcaac
ctggtgctcgagagcgtcagcagcaacggcgcacccaacggcatccgcctggtcgcgacc
ggcaccgccggctcgctccgggtcacgggtgccggtggcacctgcaccccggggagcacc
gcgggctgcaccggcggcgagatcgccaacagcaccggctcctccccgagcggcgatgcg
ccggacggcacgggtgtcgtgctcagcgacacccaggcgccctcgctgacccggatgtgg
atccacggagcgggcaactacgcgctgcgcggtgaccgcacccgaggcctgacgttcgcc
gagagcgtcgtcaacggcctcaacggcgacgccgacacggactccgccgtggtgctcacc
gagctctccggcacggcgtccatcgcccggacccacctcagcggcgggtacagcgacacc
ctgcgggtcaccaacaccaccggcgacctgggccggctcaccgtcgacacggtcaccttc
ggcctcaacggcaaccggccgcagaacgacgccctccagctcgacgccagcggcgccgcc
ggtgacttcccggtcaccgtcaccgccagcaccttccagggcgcggccggcgaccagctg
cagtacggcaacgccgccaccaagcggggcgacctcgtcgtgaccgacaacgtgttcacc
aacacccacccggcgatcagcgccggcggtggcggcgtcacggtcaccgagggcggcacc
acgtcgctcgacgcgacggtcaccggcaaccagctgaccggcgccgtcggcccgggcttc
ctgttcgccaaggcgcccggctcgggcgtccagcgcggcaccttcgccaacaaccggatc
ggcaccgcgggggtcgacagctccggctccctctcggcctcgggcctcaagctgcagaac
ctcggcggcggcgggatcgtgtggggcgtcaccggcaaccaggtccgcggctacaacacc
tatggtgtcgaggtcgtcgccggcggtggcggcggtgcgcagtccggggccgtgcagacc
acggtcaccggcaatgtcatcgcccagcccggtacggcgtccgccaccctgggcatcccc
aagcagggtctgcactacaacatcggcaccacagccggggacacgttcgaggcctgcgcc
gacatccagaacaacaccctgaccggcagcggcgccgacgggaacccggcgaccgggatg
aacgtcgacgtacggctgcgccagcgccagctcaccaccttccggctgcccggctacgcg
ggcgcgaacaacggcaacgcggctgtcgagagcttcctggcgacgcgcaacgtcgccggc
gccaccgtgcgcgccgagaacagcgtcgcctccgggggcggcgggtacgtcggcgccggt
ctctcgtgcccggcggtgccctga
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