Nocardioides sp. WV_118_6: ABFU82_10705
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Entry
ABFU82_10705 CDS
T10638
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00260
Glycine, serine and threonine metabolism
nocw00460
Cyanoamino acid metabolism
nocw00630
Glyoxylate and dicarboxylate metabolism
nocw00670
One carbon pool by folate
nocw00680
Methane metabolism
nocw01100
Metabolic pathways
nocw01110
Biosynthesis of secondary metabolites
nocw01120
Microbial metabolism in diverse environments
nocw01200
Carbon metabolism
nocw01230
Biosynthesis of amino acids
nocw01240
Biosynthesis of cofactors
nocw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABFU82_10705 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ABFU82_10705 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABFU82_10705 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABFU82_10705 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABFU82_10705 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABFU82_10705 (glyA)
Enzymes [BR:
nocw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABFU82_10705 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
XBB69753
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Position
complement(2217220..2218515)
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AA seq
431 aa
AA seq
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MTVTDPTPTARVLNADLDEIDPAIAEVLDAELRRQRRGLEMIASENVAPRAVLQAQGSVL
TNKYAEGYPDRRYYGGCEHVDVAESLAIERAKTLFGAAHVNVQPHSGAQANAAVLAAIAQ
PGDVILGQELAHGGHLTHGMPANFSGRLYDARSYGVDRSSYRLDMEQVRERALAERPRVL
IAGWSAYPRHLDFAAFRSIADEVGAVLWVDMAHVAGLVATGLHPDPVRYADVVTTTTHKT
LGGPRGGLILCGADRARKIDSTVFPGQQGGPLMHVIAAKATALLLAGTPEFRERQERVVR
GARIVAERLTAPDLAAAGISVLTGGTDVHLVLLDLRDATLSGLDAERRLGDLGITTNRNV
VPFDPRPASVASGLRLGTPALAARGFGDADFTEIADVVAQALLGADPDALRARVDRLVAA
YPLYDGESARR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaccgaccccacgccgaccgcgcgcgtgctcaacgccgacctggacgagatc
gaccccgcgatcgccgaggtgctcgacgccgagctccgccggcagcggcgcggcctggag
atgatcgccagcgagaacgtcgcaccccgggcggtgctccaggcgcagggatcggtgctc
accaacaagtacgccgagggctacccggaccggcgctactacggcggctgcgagcacgtc
gacgtcgccgagagcctcgccatcgagcgggccaagacgctcttcggggccgcgcacgtc
aacgtccagccgcactcgggtgcccaggccaacgccgcggtgctcgccgcgatcgcccag
ccgggcgacgtcatcctcggccaggagctcgcccacggcggtcacctgacgcacgggatg
cccgccaacttctcgggccggctctacgacgcacgctcctacggcgtcgaccggtcgtcg
taccggctggacatggagcaggtccgcgagcgtgccctcgccgagcggccgcgggtgctg
atcgcgggctggtcggcgtacccgcggcacctggacttcgccgccttccgctcgatcgcc
gacgaggtgggcgcggtgctgtgggtcgacatggcgcacgtcgccgggctcgtcgcgacc
ggtctgcaccccgacccggtccggtacgccgacgtggtcaccacgaccacgcacaagacg
ctcggcggtccccgtggcgggctgatcctgtgcggcgccgaccgggcccggaagatcgac
tcgacggtcttccccggtcagcagggcggaccgctcatgcacgtcatcgcggccaaggcg
accgccctgctgctcgccggcaccccggagttccgcgagcgccaggagcgcgtcgtgcgg
ggcgcccggatcgtcgcggagcggctgaccgctcccgacctcgccgcggccgggatctcg
gtgctcacgggcggcaccgacgtccacctggtgctgctcgacctgcgcgacgcgacgctg
tccggcctcgacgccgagcgccggctgggcgacctgggcatcaccaccaaccgcaatgtc
gtccccttcgacccgcgcccggcctcggtcgcctcggggctgcggctcgggacgccggcg
ctggcggcccgtggcttcggcgacgccgacttcaccgagatcgccgatgtcgtcgcccag
gcgctcctcggtgccgacccggacgcgctgcgtgcccgggtcgaccggctcgtcgccgcg
tacccgctctacgacggcgagtccgctcggcgctga
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