Nocardioides sp. WV_118_6: ABFU82_10855
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Entry
ABFU82_10855 CDS
T10638
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00500
Starch and sucrose metabolism
nocw01100
Metabolic pathways
nocw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ABFU82_10855 (glgX)
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
ABFU82_10855 (glgX)
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Gene cluster
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Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
XBB69780
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Position
2244946..2247066
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AA seq
706 aa
AA seq
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MSPVLWRSLGERAPVWPGRNWPLGATWTAESTNFAVYSPRATAVWLCLADDEPDESGAAA
TAERRLPLTEQSLGIWHGAVPDIAPGTRYGFRVDGPADPAEGLRFDPDTLLLDPYARAVS
GTAGDAWSVVVDPAFDWGEDAPMRRRWRDSVIYELHVKGFTRLHDRIPEELRGTYAGLGH
PVVTEYLRDLGVTAVELLPVQQFFSEPALVERGTVNYWGYNPISYFAPDASYSSAGDRGG
QVAEFKEMVRSLHAAGLEVILDVVYNHTAEAGPEGPTYSFRGLDDRGFYRRVPTAEGFDD
TYWDVTGCGNTVNSEDPLALRLILDSLRYWVTEMHVDGFRFDLMSALTRTAGTDAVPVDM
ACKLLIAIGQDPVLRHVKLIAEPWDVSMDGYLVGDMPPPWVEWNDQYRDTIRDFWRGRSD
GTHAVATRLAGSSDLYADDGRSAYNSVNFVTAHDGFTVRDLVSYDQKHNEANGEDNRDGT
DNNRSWNHGAEGETGDPDIVALRRRQAANLMATLCLSNGVPMLTAGDERGRTQRGNNNAY
CQDNEISWMDWRADDAWLDVYAVTRAALRLRREHHALRQRHWFEGRPAIVGGPKDLAWLH
PSGREMTDDDWYDPALRTIGMFVSGKPLREPGPRGEQQLDSSFLIWFHAGAEDVEVHLPE
NDWVRSGAVVLSTDPGLPAETLLEVGGTVVLGARSVVVMQETETPD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccccgttctgtggcgctccctcggcgagcgcgcccctgtctggcccgggcgcaac
tggccgctgggggccacctggacggccgagtcgaccaacttcgcggtctactccccccgt
gccaccgcggtctggctgtgcctggccgacgacgagccggacgagtccggcgcggccgcc
accgccgagcgccggctgccgctgaccgagcagtccctcggcatctggcacggcgccgtg
cccgacatcgcgcccggcacccgctacggcttccgcgtggacggaccggccgatcctgcc
gagggcctgcgcttcgacccggacacgctcctgctcgacccctacgcccgggcggtctcc
gggaccgcgggcgacgcgtggagcgtcgtggtcgaccccgccttcgactggggcgaggac
gccccgatgcggcgccgctggcgcgactcggtgatctacgagctgcacgtcaagggcttc
acccggctgcacgaccggatccccgaggagctgcgcggcacgtacgccggcctcgggcac
cccgtcgtgaccgagtacctgcgcgatctcggggtcaccgctgtcgagctgctgccggtg
cagcagttcttctccgagccggcgctggtcgagcgcgggaccgtgaactactggggctac
aacccgatcagctacttcgcgcccgacgcgtcgtactcgtcggcgggcgaccggggcggc
caggtcgcggagttcaaggagatggtccgctcgctgcacgccgccgggctcgaggtgatc
ctcgacgtggtctacaaccacacggccgaggcggggccggaggggccgacgtactcgttc
cgggggctggacgaccgcggcttctaccggcgggtgcccactgccgagggcttcgacgac
acctactgggacgtcaccgggtgcggcaacacggtcaactccgaggacccgctcgcgctg
cggctgatcctcgactcgctgcgctactgggtgaccgagatgcacgtcgacggcttccgc
ttcgacctgatgtcggcgctgacccgcacggccggcacggacgccgtgcccgtcgacatg
gcctgcaagctgctcatcgcgatcggccaggacccggtgctgcgccacgtcaagctcatc
gccgagccctgggacgtgtcgatggacggctacctcgtcggcgacatgccgccgccctgg
gtggagtggaacgaccagtaccgcgacaccatccgcgacttctggcgcggccgctccgac
ggcacgcacgcggtcgcgacgcggctcgcgggctcctcggacctctacgcggacgacggg
cgctcggcgtacaactcggtcaacttcgtcaccgcccacgacggcttcaccgtgcgcgac
ctcgtgtcgtacgaccagaagcacaacgaggccaacggcgaggacaaccgcgacggcacc
gacaacaaccgctcctggaaccacggtgcggagggcgagaccggcgatcccgacatcgtc
gcgctgcgccggcgccaggccgccaacctgatggcgacgctgtgcctgtccaacggcgtt
ccgatgctcaccgccggcgacgagcgcgggcgcacccagcgcggcaacaacaacgcctac
tgccaggacaacgagatctcctggatggactggcgcgccgacgacgcctggctcgacgtg
tacgccgtgacgcgcgccgccctgcgcctgcgccgcgagcaccacgccctgcgccagcgg
cactggttcgagggccggcccgccatcgtcggcggccccaaggacctcgcctggctgcac
ccgtcgggacgcgagatgaccgacgacgactggtacgaccccgcgctgcgcaccatcggg
atgttcgtgtccggcaagccgctgcgcgagcccggcccgcgcggcgagcagcagctcgac
tcgtcgttcctgatctggttccacgcgggcgccgaggacgtcgaggtgcacctgcccgag
aacgactgggtgcgctcgggcgcggtcgtgctgtcgaccgaccccgggctgcctgccgag
acgctgctggaggtcggcgggacggtggtgctcggggcgcggagcgtcgtggtgatgcag
gagaccgagaccccggactga
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