Nocardioides sp. WV_118_6: ABFU82_11295
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Entry
ABFU82_11295 CDS
T10638
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02024
Quorum sensing
nocw03060
Protein export
nocw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ABFU82_11295 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABFU82_11295 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_11295 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nocw02044
]
ABFU82_11295 (ffh)
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ABFU82_11295 (ffh)
Secretion system [BR:
nocw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ABFU82_11295 (ffh)
Eukaryotic Sec-SRP protein
ABFU82_11295 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
ArsA_ATPase
nSTAND3
Zeta_toxin
APS_kinase
AAA_31
ParA
AAA_33
NPHP3_N
AAA_24
MeaB
Thymidylate_kin
CLP1_P
NTPase_1
SLFN-g3_helicase
NACHT
AAA_16
MobB
AAA_18
Mg_chelatase
TsaE
6PF2K
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
XBB69863
LinkDB
All DBs
Position
complement(2339094..2340671)
Genome browser
AA seq
525 aa
AA seq
DB search
MFATLSDRLTATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVKEFVAAIKERAR
GEEVSGALNPAQQVVKIVNDELVAILGGETRRLRYAKSGPTVIMLAGLQGAGKTTLAAKL
ALWLKEQGKTPMLVACDLQRPNAVQQLQVNGDKVGVPVFAPEPGNGVGDPVSVAKASIEE
AKRKLHDVVIVDTAGRLGVDAEMMAQAAGIRDAVQPDEVLFVVDAMIGQDALVTAQAFLD
GVGYDGVVLTKLDGDARGGAALSIRQVTGRPVMFASSGEKMTDFDVFHPDRMASRILDMG
DVLTLIEQAEKAFDQEEAMKAAEKLSGGDFTLDDFLSQMQQLKKLGSMQKILGMLPGMGQ
IREQLENFDEREIDRVEAVIRSMTPAERANPKIIDGSRRARIAKGSGRNVSDVNQLVDRF
FEARKMMMQMAKGGGMPGMPGMPGMPGMGGPGGGKRVSAKQKAKQTKGKGARRSGNPAKA
AQDAAAAKAKAAEAKPNPFGIGQDIDYEAAAQNLELPKDFSKFLK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgccacattgtcagaccgcctcaccgcgaccttcaagaacctccgcggcaaggga
cggctctccgaggccgacatcgacgcgaccgcgcgcgagatccgcatcgccctcctcgag
gccgacgtcgcgctgcccgtcgtcaaggaattcgtcgccgcgatcaaggagcgcgcccgg
ggcgaagaggtcagcggcgcgctgaaccccgcccagcaggtcgtcaagatcgtcaacgac
gagctcgtcgcgatcctcggcggcgagacccgccggctgcgctacgccaagtccggcccg
accgtcatcatgctcgccggcctccagggcgcgggcaagacgaccctcgcggccaagctc
gcgctgtggctcaaggagcagggcaagaccccgatgctcgtggcctgcgacctgcagcgg
cccaacgccgtccagcagctccaggtcaacggcgacaaggtcggcgtcccggtcttcgcg
cccgagccgggcaacggcgtcggcgacccggtctccgtcgccaaggcctcgatcgaggag
gccaagcgcaagctgcacgacgtcgtcatcgtcgacaccgcgggtcggctcggcgtcgac
gccgagatgatggcccaggcggccggcatccgcgacgccgtccagcccgacgaggtgctc
ttcgtcgtcgacgcgatgatcggccaggacgcgctcgtcaccgcgcaggccttcctcgac
ggcgtcgggtacgacggcgtcgtcctcaccaagctcgacggcgacgcccgcggtggtgcc
gccctctccatccgccaggtcaccggccgcccggtcatgttcgcctcctccggcgagaag
atgaccgacttcgacgtcttccaccccgaccggatggcctcgcgcatcctggacatgggc
gacgtcctcaccctgatcgagcaggccgagaaggccttcgaccaggaagaggcgatgaag
gcggccgagaagctctccggcggcgacttcacgctcgacgacttcctctcgcagatgcag
cagctgaagaagctcggctcgatgcagaagatcctcgggatgctgcccggcatgggccag
atccgcgagcagctcgagaacttcgacgagcgcgagatcgaccgggtcgaggcggtcatc
cgctcgatgacccccgccgagcgcgccaaccccaagatcatcgacggctcgcgccgcgcc
cggatcgccaagggctcgggccgcaacgtctccgacgtcaaccagctcgtcgaccgcttc
ttcgaggcgcgcaagatgatgatgcagatggccaagggcggcggcatgcccgggatgccc
ggcatgccggggatgcccggcatgggcggccccggcggcggcaagcgcgtcagcgccaag
cagaaggccaagcagaccaagggcaagggcgcccgccgctccggcaacccggccaaggct
gcccaggacgccgcggccgcgaaggccaaggccgccgaggccaagccgaacccgttcggc
atcggccaggacatcgactacgaggcggccgcccagaacctggagctgccgaaggacttc
tccaagttcctcaagtga
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