Nocardioides sp. WV_118_6: ABFU82_11345
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Entry
ABFU82_11345 CDS
T10638
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nocw03036
]
ABFU82_11345 (smc)
Chromosome and associated proteins [BR:
nocw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
ABFU82_11345 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF5915
Motif
Other DBs
NCBI-ProteinID:
XBB69873
LinkDB
All DBs
Position
complement(2348931..2352539)
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AA seq
1202 aa
AA seq
DB search
MYLKSLTLKGFKSFASATTLQLEPGITCIVGPNGSGKSNVVDALAWVMGEASAKSLRGGK
MDDVIFAGTSGRPPLGRAEVVLTIDNTDGALPIEYSEVTISRTMFRTGGSEYAINGTTCR
LLDVQELLSDSGIGREMHVIVGQGQLDQILHATPEDRRGFIEEAAGVLKHRKRKEKALRK
LDSTEGNLNRLNDLLSEIRRQLKPLGRQAEVARRAATVQADVRDAKARLLADDLVTARTS
LEQELADESVLLQRREEVETAIATAREQETALEAALREDLPALSAAQETLSSLQALRERF
RGTQSLAAERVRNAAGVAEAEVETGRDPDELDAEAARLAAHEAEITALVTDQQAALEAAV
AARRESEDAAAAEERRVAGLLRAAADRREGLARLHGQVNTLRSRATAAEEEIGRLESART
DAIARAERSQRDFTALETQVAGLDAGEEGLDAEHEAAVASFDDLEDRLAKVREEAQQADR
DKAGLSARKEALELGLARKDGAGALLAASDEISGLLGSVAALVTVRSGYEGAVAAALGAA
ADAVAVTDADTAVAAIHHLKADDLGRAGLLLGGSGGADAETPASWPALPPGAAYAATVVD
CPAPVRPALNRLLRKVAVVDDLPAARALVADLADVVAVTRDGDLFGAHFASGGSHATQSL
IEIQAAVDEATESLAEAVAAAERLSFDLARIENERAEAKQRVDVALARLHESDATLAAVA
EELGQHGSLARAARAEAERMTEAIAQAETSREQALVGLAELEQRLASAEQDTDEEPDTTE
QERLVEATRNARQSEMEARLALRTSEERGRALHGRVEAMRKAAEAERVSRARAAERRERL
LTEGRAGQAVATAVTFVLARLESSIDEATGRRTAVEDSRRGREHELMGVRQALRDLGKEH
GELISSVHRDEMARAQQRMRIEQIETKALEELGLEPDGLVADYGPDQPVPVLEPAVAVQA
DADGDAEGGDADEADAVPRTVPYVRDEQVKRLKSAEKALSMLGKVNPLALEEFSAMEERH
QFLSEQLEDLRQTRKDLLDIVKDVDVRVEAVFTEAYADVTKAFDQTFARLFPGGEGRLVL
TDPANMLTTGIEVEARPPGKKVKRLSLLSGGERSLVAVAFLVALFKARPSPFYILDEVEA
ALDDTNLGRLLEIYEELRENSQLLVITHQKRTMEVGDALYGVTMRGDGVSAVISQRLRDE
SA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctgaagagcctgaccctcaaggggttcaagtccttcgcgtccgcgaccaccctc
cagctcgagcccggcatcacgtgcatcgtcggccccaacggctccggcaagtccaatgtc
gtcgacgccctcgcgtgggtgatgggcgaggcgagcgccaagagcctgcgcggcggcaag
atggacgacgtcatcttcgccggtacgtcgggccgcccgccgctgggccgggccgaggtc
gtgctgaccatcgacaacaccgacggcgcgctgccgatcgagtactccgaggtcacgatc
agccggaccatgttccgcaccggcggctccgagtacgccatcaacggcaccacgtgccgg
ctgctcgacgtccaggagctcctcagcgactccggcatcggtcgcgagatgcacgtcatc
gtcggccagggccagctcgaccagatcctgcacgcgacgccggaggaccggcgcgggttc
atcgaggaggccgccggcgtcctcaagcaccgcaagcgcaaggagaaggcgctccgcaag
ctcgactccaccgagggcaacctcaaccggctcaacgacctgctcagcgagatccggcgc
cagctcaagccgctgggccgccaggccgaggtggcccgccgggcggcgacggtccaggcc
gacgtccgcgacgccaaggcccggctgctggccgacgacctggtgaccgcgcggacgtcg
ctggagcaggagctcgccgacgagagcgtgctgctccagcgccgcgaggaggtcgagacc
gcgatcgcgaccgcgcgcgagcaggagaccgctctcgaggccgcgctgcgcgaggacctc
ccggcgctgtccgccgcccaggagacgctgtcctccctccaggcgctgcgcgagcgcttc
cgcggcacccagagcctggccgccgagcgggtccgcaacgccgccggcgtcgccgaggcc
gaggtcgagacgggccgcgaccccgacgagctcgacgccgaggccgcccgcctggctgcc
cacgaggccgagatcaccgcgctcgtcaccgaccagcaggccgcgctcgaggccgccgtc
gcggcccggcgcgagtccgaggacgccgcggccgccgaggagcgccgggtcgccggcctg
ctccgagccgccgccgaccggcgcgagggcctggcccggctccacggccaggtcaacacg
ctgcgctcgcgggctaccgccgccgaggaggagatcggccgcctcgagtcggcccgtacc
gacgcgatcgcgcgtgccgagcgctcccagcgcgacttcaccgccctcgagacccaggtc
gccggcctcgacgccggtgaggagggtctcgacgccgagcacgaggcggccgtcgcctcc
ttcgacgacctcgaggaccgcctcgccaaggtccgcgaggaggcccagcaggccgaccgc
gacaaggccggcctcagcgcccgcaaggaggcgctcgagctcggcctcgcccgcaaggac
ggcgccggcgccctcctggccgccagcgacgagatctccggcctgctcggctcggtggcc
gcgctggtcaccgtccgctcggggtacgagggcgccgtggccgccgccctgggcgcggcc
gccgacgcggtcgccgtcaccgacgccgacaccgccgtcgccgcgatccaccacctcaag
gccgacgacctcggccgggccgggctgctgctcggcgggtccggcggtgccgacgccgag
acgcccgcgtcctggccggcgctgccccccggggcggcgtacgccgcgacggtggtcgac
tgccccgccccggtccgcccggccctcaaccgcctgctgcgcaaggtcgcggtcgtcgac
gacctccccgccgcccgcgcgctcgtcgccgaccttgccgacgtcgtcgcggtgacccgc
gacggcgacctgttcggtgcccacttcgcctccggtggctcccacgcgacccagagcctg
atcgagatccaggccgccgtcgacgaggccaccgagtcgctcgccgaggcggtcgccgcc
gccgagcgcctctccttcgacctggctcggatcgagaacgagcgggccgaggccaagcag
cgcgtcgacgtcgcgctcgcccggctccacgagtccgacgccaccctcgccgcggtcgcc
gaggagctcggccagcacggctcgctcgcccgcgccgcgcgcgccgaggccgagcggatg
accgaggcgatcgcccaggccgagacctcccgcgagcaggccctggtcggcctcgccgag
ctggagcagcgcctcgcgagcgccgagcaggacaccgacgaggagcccgacaccaccgag
caggagcggctggtcgaggccacccgcaacgcccggcagtccgagatggaggcccggctc
gcgctgcgcacctccgaggagcgcggccgcgccctgcacggccgggtcgaggcgatgcgc
aaggccgccgaggccgagcgggtctcccgggcccgcgccgccgagcgccgcgagcggctg
ctcaccgagggccgggccggccaggcggtcgccaccgcggtcaccttcgtgctggcgcgc
ctggagtcgtcgatcgacgaggccaccggacgccgtacggcggtcgaggactcgcgccgc
ggccgcgagcacgagctcatgggcgtgcgccaggcgctgcgcgacctcggcaaggagcac
ggcgagctgatcagctcggtgcaccgcgacgagatggcccgcgcccagcagcggatgcgg
atcgagcagatcgagaccaaggcgctcgaggagctcggcctcgagcccgacggcctcgtc
gccgactacggccccgaccagccggtcccggtgctcgagcccgcggtcgccgtccaggcc
gacgccgatggggacgccgagggcggcgacgccgacgaggccgacgccgtcccgcggacc
gtgccctacgtccgcgacgagcaggtcaagcgcctcaagtcggccgagaaggcgctctcg
atgctcggcaaggtcaacccgctggcgctcgaggagttctccgcgatggaggagcgccac
cagttcctctccgagcagctcgaggacctgcgccagacccgcaaggacctcctcgacatc
gtcaaggacgtcgacgtccgcgtcgaggccgtcttcaccgaggcctacgccgacgtgacc
aaggccttcgaccagaccttcgcccgactcttccccggcggcgagggccgcctggtcctc
accgacccggccaacatgctcaccaccggcatcgaggtcgaggcccgcccgcccggcaag
aaggtcaagcgcctctcgctgctctccggcggcgagcgctcgctggtcgcggtcgccttc
ctggtcgcgctgttcaaggcccgcccctcgccgttctacatcctcgacgaggtcgaggcc
gcgctcgacgacaccaacctgggccgcctcctggagatctacgaggagctgcgcgagaac
tcccagctcctcgtcatcacccaccagaagcgcaccatggaggtcggcgacgccctctac
ggcgtcaccatgcgcggcgacggcgtgtccgcggtgatcagccagcggttgcgggacgag
tccgcgtga
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