Nocardioides sp. WV_118_6: ABFU82_11460
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Entry
ABFU82_11460 CDS
T10638
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_11460
03036 Chromosome and associated proteins [BR:
nocw03036
]
ABFU82_11460
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_11460
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABFU82_11460
Chromosome and associated proteins [BR:
nocw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABFU82_11460
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABFU82_11460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
XBB69894
LinkDB
All DBs
Position
complement(2371755..2372387)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKSQLIDTLADRFEGSRKDAAHALDAVLDTITRQVAKGEKVAITGFGSFEKAVRNARWV
RNPQTGERVKTKKKSVPKFSAGADLKNVVSGAKKLPALPKPAKKAAAPAKKAAASVAKKA
AAPAKKAATAAKKAAPAKKAPAKKAPAAKKAAPAKKAPAKKAPAAKKAAPAKKAPAKKAP
AAKKAAPAKKAPAKKAPAKKAPAKKAAKKA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcagttgatcgacacgctggctgaccggttcgagggcagccgcaaggac
gcggcccacgctctcgacgcggtcctcgacaccatcacgcgccaggtcgccaagggcgag
aaggtcgccatcacgggcttcggctccttcgagaaggccgttcgcaacgcccgttgggtc
cgcaacccccagacgggcgagcgggtcaagaccaagaagaagtcggttccgaagttcagc
gccggcgctgacctgaagaacgtcgtctccggcgcgaagaagcttccggccctgccgaag
cccgccaagaaggctgccgcccccgcgaagaaggccgccgcctccgtcgccaagaaggct
gctgctccggcgaagaaggctgcgaccgccgccaagaaggccgccccggccaagaaggct
ccggccaagaaggctcccgccgcgaagaaggcggctccggccaagaaggcgcccgcgaag
aaggctcccgccgcgaagaaggcggctccggccaagaaggcgcccgcgaagaaggctccc
gctgccaagaaggccgctccggccaagaaggctccggccaagaaggcccccgccaagaag
gctccggccaagaaggccgcgaagaaggcctga
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