KEGG   Nocardioides sp. WV_118_6: ABFU82_13250
Entry
ABFU82_13250      CDS       T10638                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nocw  Nocardioides sp. WV_118_6
Pathway
nocw00010  Glycolysis / Gluconeogenesis
nocw00020  Citrate cycle (TCA cycle)
nocw00260  Glycine, serine and threonine metabolism
nocw00280  Valine, leucine and isoleucine degradation
nocw00310  Lysine degradation
nocw00380  Tryptophan metabolism
nocw00620  Pyruvate metabolism
nocw00630  Glyoxylate and dicarboxylate metabolism
nocw00640  Propanoate metabolism
nocw00670  One carbon pool by folate
nocw00785  Lipoic acid metabolism
nocw01100  Metabolic pathways
nocw01110  Biosynthesis of secondary metabolites
nocw01120  Microbial metabolism in diverse environments
nocw01200  Carbon metabolism
nocw01210  2-Oxocarboxylic acid metabolism
nocw01240  Biosynthesis of cofactors
Module
nocw_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nocw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nocw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nocw_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nocw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ABFU82_13250 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ABFU82_13250 (lpdA)
   00620 Pyruvate metabolism
    ABFU82_13250 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ABFU82_13250 (lpdA)
   00640 Propanoate metabolism
    ABFU82_13250 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ABFU82_13250 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ABFU82_13250 (lpdA)
   00310 Lysine degradation
    ABFU82_13250 (lpdA)
   00380 Tryptophan metabolism
    ABFU82_13250 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ABFU82_13250 (lpdA)
   00670 One carbon pool by folate
    ABFU82_13250 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nocw04147]
    ABFU82_13250 (lpdA)
Enzymes [BR:nocw01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ABFU82_13250 (lpdA)
Exosome [BR:nocw04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ABFU82_13250 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_3 FAD_binding_2 HI0933_like NAD_binding_8 GIDA Thi4 DAO AlaDh_PNT_C 3HCDH_N 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: XBB70232
LinkDB
Position
complement(2736509..2737909)
AA seq 466 aa
MTHFDVLVLGAGPGGYVAAIRAAQLGKSVAVIEKKYWGGVCLNVGCIPSKALLKNAELAH
TLTHEKAKFGIEGDATMSYGPTHARSRQVSAGIVKGVHFLMKKNKITEIDGWGTLTGPKS
VSVALNDGSTADYTCDSLILAGGATVRTVPGVEVNGKNIVSYEEQILDENLPSSVIIGGS
GAIGVEFAYVMKNFGVDVTIVEFLDRMVPTEDADVSKELAKHYKKLGVKVLTSTAVKGVE
DTGSGVKVRIAPAAGGDEQVLEADKFLAAFGFAPRVEGYGLEAAGVALTDRGAIAIDEYC
RTNVEGVYAIGDVTGKMMLAHVAEAMGIVAAETIAGAETMPVEYDFIPRATYCQPQIGSF
GYSEQQAKDKGYDVKTASFPFTANGKAMGLGEAVGFVKIVADAEFNEILGAHMIGPDVTE
LLPALTLAQKWDLTADEVGRNVFAHPTLSEAVKEAIHGIAGHMINL
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtgacccacttcgatgtcctcgtcctcggtgccggccccggtgggtacgtcgccgcgatc
cgcgccgcccagctcggcaagtccgttgccgtgatcgagaagaagtactggggcggcgtc
tgtctcaacgtcggctgcatcccctccaaggcgctgctcaagaacgccgagctcgcccac
acgctgacccacgagaaggccaagttcggcatcgagggcgacgccacgatgtcctacggc
ccgacgcacgcgcgctcgcgccaggtgagcgccggcatcgtcaagggcgtccacttcctg
atgaagaagaacaagatcaccgagatcgacggctggggcaccctgaccggtcccaagtcg
gtctccgtcgcgctcaacgacggctccaccgccgactacacgtgcgacagcctgatcctc
gccggcggcgccaccgtccgtaccgtcccgggcgtcgaggtcaacggcaagaacatcgtg
tcgtacgaggagcagatcctcgacgagaacctcccgtcgtccgtcatcatcggcggctcc
ggcgccatcggcgtcgagttcgcctacgtgatgaagaacttcggcgtcgacgtcaccatc
gtcgagttcctcgaccggatggtccccaccgaggacgccgacgtgtccaaggagctcgcc
aagcactacaagaagctgggcgtcaaggtgctcacctccaccgccgtcaagggcgtcgag
gacaccggctcgggcgtcaaggtccgcatcgcccccgctgccggcggtgacgagcaggtc
ctcgaggccgacaagttcctcgccgccttcggcttcgccccccgcgtcgagggctacggc
ctcgaggccgccggcgtcgccctcaccgaccgcggcgcgatcgccattgacgagtactgc
cgcaccaacgtcgagggcgtctacgccatcggcgacgtcaccggcaagatgatgctcgcc
cacgtcgccgaggccatgggcatcgtcgccgccgagacgatcgccggcgccgagaccatg
ccggtcgagtacgacttcatcccgcgcgcgacctactgccagccccagatcggctccttc
ggctacagcgagcagcaggccaaggacaagggctacgacgtcaagaccgcgtccttcccc
ttcaccgccaacggcaaggccatgggcctgggcgaggccgtcggcttcgtcaagatcgtc
gccgacgccgagttcaacgagatcctcggcgcccacatgatcggccccgacgtcaccgag
ctcctccccgcgctgaccctcgcgcagaagtgggacctcaccgccgacgaggtcgggcgc
aacgtcttcgcccacccgaccctctccgaggcggtcaaggaggcgatccacgggatcgcc
ggccacatgatcaacctctga

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