Nocardioides sp. WV_118_6: ABFU82_15605
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Entry
ABFU82_15605 CDS
T10638
Name
(GenBank) ABC transporter permease subunit
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_15605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocw02000
]
ABFU82_15605
Transporters [BR:
nocw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABFU82_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF3188
Motif
Other DBs
NCBI-ProteinID:
XBB65533
LinkDB
All DBs
Position
complement(3196183..3197094)
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AA seq
303 aa
AA seq
DB search
MGVTPLRRRAGARRSTSHVIGSSGLSVLPAVVAFALAVLAPAAVIFHQSLQPNPLGDPSA
AHETWGNYDRLLTDPIYRDVMLRTLRVSVIGGVASVLIGLALVVALTAFRRREVSSVWLF
LLVAPILSGPVITVLGWMGLFVEGGLGYRVVNALRPLWGGSPGRVAETEIAMTIGTVHFV
VPFVVLTLYPIARTVSKDLLEASLTLGVSPVRTVFRVVLPLCRPGILAASIVGLAMALSA
FVNARFLGGERNLVLTTLVSQLVNTFNPTLAAASSVLLVGLGLLLVGIYGRVLSRSAARE
VSR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgggagtgacaccgctgcggcggcgtgcgggcgcgcggaggtcgacgagccacgtcatc
ggctcgtcgggcctgtccgtgctgcccgccgtcgtcgccttcgccctcgccgtgctggcg
ccggcggcggtcatcttccaccagagcctgcagcccaacccgctgggcgacccgagcgcg
gcgcacgagacgtggggcaactacgaccggctgctgaccgacccgatctaccgcgacgtc
atgctgcgcacgctgcgggtcagcgtgatcggcggtgtggccagcgtgctcatcgggctc
gcgctggtggtcgcgctgaccgccttccggcgccgggaggtcagctcggtgtggctcttc
ctcctggtcgcgccgatcctgtcgggaccggtgatcaccgtgctcggctggatgggtctc
ttcgtggagggcggcctcggctaccgcgtggtcaacgcgctgcggcccttgtggggcggt
agccccggccgggtcgcggagaccgagatcgcgatgacgatcggcacggtccacttcgtc
gtcccgttcgtggtgctcacgctctacccgatcgcgcgcaccgtctccaaggacctgctc
gaggcctcgctcaccctcggggtctcgccggtacggacggtcttccgcgtcgtcctcccg
ctgtgccggccggggatcctcgccgcctcgatcgtgggcctggcgatggcgctgagcgcg
ttcgtcaacgcccggttcctcggcggcgagcgcaacctcgtgctcaccacgctggtgagc
cagctcgtcaacacgttcaacccgacgctcgccgcggccagctcggtgctgctcgtcggg
ctcggcctgctcctcgtcggcatctacggccgggtcctcagccgcagcgccgcgcgcgag
gtgtcccgatga
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