Nocardioides sp. WV_118_6: ABFU82_15610
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Entry
ABFU82_15610 CDS
T10638
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_15610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocw02000
]
ABFU82_15610
Transporters [BR:
nocw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABFU82_15610
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
XBB65534
LinkDB
All DBs
Position
complement(3197085..3198314)
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AA seq
409 aa
AA seq
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MSLIGSQKASHRLGERDEWAHDVATRLGSSAHLAQVRASLGALATASGSRRDVLKWLGIG
AGVAAAPTLLAACGSDASTSPGSAGTGIPDGSGRTLSVSVWGGETERAFKETVEPVFRKL
TGAKVQYDTGSGGERFNKLLAQIGSPTVDVFINSGENVYQANRQGLLTDIDTRRVPNAAD
IADWAKLFPYGISYGLVAFGLTRAKGVPALTSWGDLWRPELAGRLGLPGIGHTQMPMFLI
MAAELNGGSATDIDPGLKALAKLDPAVLQYFWTEWADRAKGGEVDVVPEFNYSLLGANDA
GVGFSFDFPQEKAIAADNTMAIVKGRPNEDLAHVFLDVAFDADVQTAFCGEWLGSPANTK
ATIAPKVAGKVPLASEILDQVRFFDLGEIANKRAEWTERLNSEVLPSWE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatcggttcgcagaaggcgtcgcacaggctcggggagcgcgacgaatgggca
cacgacgtcgcgacccggctcgggtcgtcggcgcacctggcgcaggtgcgcgcctcgctc
ggcgccctcgccacggcgagcggctcgcgccgcgacgtcctcaagtggctgggcatcggc
gccggtgtcgcggccgcgccgacgctgctggcggcgtgcggcagcgacgcgagcacctcg
ccgggctcggcaggcaccggcatccccgacgggagcggccgcacgctgtcggtctcggtg
tggggcggtgagaccgagcgcgccttcaaggagaccgtcgagccggtcttccgcaagctc
accggcgccaaggtgcagtacgacaccggctcgggcggcgagcggttcaacaagctcctg
gcccagatcggctcgccgaccgtcgacgtgttcatcaactcgggcgagaacgtctaccag
gccaaccgccaggggctgctgaccgacatcgacacccggcgcgtcccgaacgccgccgac
atcgccgactgggccaagctcttcccctacggcatctcctacgggctcgtcgccttcggc
ctgacccgggccaagggggtgccggcgctgacgagctggggtgacctgtggcgtcccgag
ctcgccggccggctcggcctgccgggcatcgggcacacccagatgccgatgttcctgatc
atggccgccgagctcaacggcggctcggccaccgacatcgaccctgggctcaaggcgctg
gccaagctcgatcccgccgtgctccagtacttctggaccgagtgggccgaccgggccaag
ggcggcgaggtggacgtcgtccccgagttcaactactcgctgctcggcgcgaacgacgcg
ggcgtcggcttctccttcgacttcccacaggagaaggcgatcgccgccgacaacacgatg
gcgatcgtcaagggccggcccaacgaggacctcgcgcacgtcttcctcgacgtcgccttc
gacgccgacgtgcagaccgccttctgcggagagtggctgggctcgccggccaacaccaag
gccacgatcgcgccgaaggtcgccggcaaggtgccgctcgcgtccgagatcctcgaccag
gtccggttcttcgacctgggcgagatcgccaacaagcgggccgagtggaccgagcggctg
aactccgaggtgctgccctcgtgggagtga
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