Nocardioides sp. WV_118_6: ABFU82_15645
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Entry
ABFU82_15645 CDS
T10638
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00750
Vitamin B6 metabolism
nocw01100
Metabolic pathways
nocw01240
Biosynthesis of cofactors
Module
nocw_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ABFU82_15645 (pdxS)
Enzymes [BR:
nocw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ABFU82_15645 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
IGPS
NMO
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
XBB65541
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Position
complement(3205336..3206217)
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AA seq
293 aa
AA seq
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MSTGTTRVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVSRM
SDPDMIDGIIAAVSIPVMAKARIGHFAEAQVLQSLGVDYIDESEVLTPADYANHIDKWNF
TVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNAVTHMRTIRAEIRRLGALAEDE
LYVAAKELQAPYDLVVEVARTGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKS
GNPAQRAEAIVKATTFHDDPDVVAKVSRGLGEAMVGINVDEPARSIQFAERGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgggacgacccgggtcaagcgcggcatggccgagatgctcaaggggggtgtg
atcatggacgtggtcacccccgagcaggccaagatcgccgaggacgccggcgcggtcgcg
gtgatggcgttggagcgggtcccggccgacatccgcgcccagggcggggtgtcgcggatg
agcgacccggacatgatcgacgggatcatcgcggcggtctcgatcccggtgatggccaag
gcccggatcgggcacttcgccgaggcccaggtcctgcagtcgctcggtgtggactacatc
gacgagtccgaggtcctgaccccggccgactacgccaaccacatcgacaagtggaacttc
accgttccgttcgtgtgcggtgcgaccaacctgggcgaggcgctgcgccggatcaccgag
ggcgcggcgatgatccgctccaagggcgaggccggcaccggtgacgtttccaacgcggtg
acccacatgcgcaccatccgcgccgagatccgccgcctcggcgcactggccgaggacgag
ctctacgtcgcggccaaggagctccaggcgccttacgacctggtggtcgaggtcgcccgc
accggcaagctcccggtggtgctgttcaccgccggtgggatcgcgaccccggcggacgcg
gcgatgatgatgcagctcggcgccgagggtgtgttcgtgggctcggggatcttcaagtcg
ggcaacccggcccagcgggccgaggcgatcgtgaaggccacgaccttccacgacgatcct
gatgtggtcgcgaaggtctcgcgtggtctgggtgaggcgatggtcggcatcaacgtcgac
gagcccgcccgctcgatccagttcgccgagcgcggctggtag
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