Nocardioides sp. WV_118_6: ABFU82_16085
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Entry
ABFU82_16085 CDS
T10638
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABFU82_16085 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nocw01007
]
ABFU82_16085 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocw03016
]
ABFU82_16085 (lysS)
Enzymes [BR:
nocw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABFU82_16085 (lysS)
Amino acid related enzymes [BR:
nocw01007
]
Aminoacyl-tRNA synthetase
Class I (A)
ABFU82_16085 (lysS)
Transfer RNA biogenesis [BR:
nocw03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABFU82_16085 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
YqhI
Motif
Other DBs
NCBI-ProteinID:
XBB65628
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Position
3303072..3304751
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AA seq
559 aa
AA seq
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MARGQRNQQGDQQQAPSDWVTRTADLALRHAESVNGGTLPELVTCASGISPSGPIHLGNL
REFLTVHFVAEEIRRRGINVRHLHSWDDYDRFRKVPAGVDPSWSEHIGRPLSAVPDPTGE
FASWGERYKAPLRAALVEMGCEMVEVDQTEMYTSGAYRDQVLTAIRKRGEIESVMAQFRT
KKTDDAPADDEGSTEGDLARFPYKPYCRGCGRDTVTLTSYDDETTDLAYTCDVCGDSYVT
NVATQNEGKLVWKVDWPMRWTYEGVHFEPGGVDHASPGSSYTVGKAIVAPVFGGSAPSFV
GYSFVGVAGMPKMSSSKGGVPTAAEALRILEAPILRWLYVRRQPKQAFNVDFGQEVLRLY
DEWDALTKKAAIPEKRDAAVLAWERASATSTAGTLPTPAVVVPFRMLSSVADVTAGSREI
TAATVGATEADLAPRLEKAATWITDYVDPEDRTTVREAPDTARLAALDEAEARWLGLLLD
GLPESFDTEALTTLIYGVPKVARGLAAEDAPTDEVKADQKAFFKLLYELLVAAERGPRLP
TLFAALGVDDVRRLLTPPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgaggacagcgcaaccagcagggcgaccagcagcaggcccccagcgactgggtg
acccggaccgccgacctggcgctccggcacgccgagtccgtcaacggcgggacgctgccc
gagctcgtcacgtgcgcgtccggcatcagcccctcgggcccgatccacctcggcaacctg
cgcgagttcctcaccgtgcacttcgtcgccgaggagatccgccggcgcggcatcaacgtc
cggcacctgcacagctgggacgactacgaccggttccgcaaggtccccgccggcgtcgac
ccgtcgtggagcgagcacatcggccgaccgctgtccgccgtccccgacccgaccggcgag
ttcgcgagctggggcgagcgctacaaggcgccgctgcgggccgcgctcgtcgagatgggc
tgcgagatggtcgaggtggaccagaccgagatgtacacctcgggcgcctaccgcgaccag
gtgctcaccgccatccgcaagcgcggcgagatcgagtcggtcatggcgcagttccgcacc
aagaagaccgacgacgcgcccgccgacgacgagggctccaccgagggcgacctcgcccgg
ttcccctacaagccctactgccgcggctgcggtcgcgacaccgtcaccctcacgtcgtac
gacgacgagacgaccgacctggcctacacctgtgacgtgtgcggtgactcctacgtcacc
aacgtcgcgacccagaacgagggcaagctcgtctggaaggtcgactggccgatgcgctgg
acctacgagggcgtgcacttcgagcccggcggcgtcgaccacgcgagcccggggtcgtcc
tacaccgtcggcaaggcgatcgtcgcccccgtcttcggcggctccgcgccgtccttcgtc
ggctactcgttcgtcggcgtggccggcatgcccaagatgtcctcgtccaagggcggggtg
cccaccgcggccgaggcgctgcgcatcctcgaggcgccgatcctgcgctggctctacgtg
cgccgccagcccaagcaggccttcaacgtcgacttcggccaggaggtcctgcgcctgtac
gacgagtgggacgcgctgaccaagaaggccgcgatccccgagaagcgcgatgccgcggtg
ctcgcctgggagcgggcgtccgcgacctcgaccgcgggcacgctgccgacgccggcggtc
gtcgtaccgttccggatgctgtcgtcggtcgccgacgtcaccgccgggtcccgcgagatc
accgccgccaccgtcggcgcgaccgaggccgacctggccccgcggctcgagaaggccgcc
acctggatcaccgactacgtcgaccccgaggaccgtacgactgtccgcgaggcccccgac
accgcccgcctcgccgcgctcgacgaggccgaggcacgctggctgggcctgctgctcgac
ggcctcccggagtccttcgacaccgaggcgctgaccacgctgatctacggcgtccccaag
gtcgcccgcgggctcgccgccgaggacgcgccgaccgacgaggtcaaggccgaccagaag
gcgttcttcaagctgctctacgagctcctcgtcgccgccgagcgcggcccgcggctgccc
acgctgttcgcggcgctgggggtcgacgacgtgcgcaggctgctgacgcccccggcatag
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