Nocardioides sp. WV_118_6: ABFU82_16185
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Entry
ABFU82_16185 CDS
T10638
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nocw03110
]
ABFU82_16185 (clpB)
Chaperones and folding catalysts [BR:
nocw03110
]
Heat shock proteins
HSP100
ABFU82_16185 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
IstB_IS21
TniB
AAA_14
AAA_7
Mg_chelatase
AAA_18
bpMoxR
NBD_SMAX1
T2SSE
AAA_24
Mod_r
MscS_porin
DUF815
AAA_19
ABC_tran_CTD
DNA_pol3_delta2
Dsc3_C
AAA_25
SPATA1_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
XBB65646
LinkDB
All DBs
Position
complement(3323985..3326576)
Genome browser
AA seq
863 aa
AA seq
DB search
MSQFGADKFTTRSREAIEAAQLAATTAGNTTVEPIHLLVALLLQNDGTAASLVAKAGVDV
PQLVHAASAARDALPRASGATVQQPSGSAALTRVLASALDLARSMKDDYVASEHLLIALA
TVESSARTVLTDAGLTEEGLRASLAAVRGDRRVTSQDAEDTYEALEKYSVDLTSAAEDGK
LDPVIGRDQEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGKR
VLSLDLMGMVAGAKYRGEFEERLKAVLDEIKQAEGKVITFIDELHTVVGAGAGGDSQMDA
GNMLKPMLARGELHMIGATTLDEYRESIEKDPALERRFQQVFVGEPSVEDTIQILRGILE
KYEAHHGVRITDAALVAAATLSDRYITGRQLPDKAIDLVDEAASRLRMEIESSPEEIDQL
RRQVDRLKMEEFALAKESDDASRERLDVLRQDLADKEEELRGLEARWEREKSELEGEGAL
RRQLDQLRVEADKLTREGNLAGASEVLYGQIPALEQQIKAVEAVEDAEPVAEKLVGEEVG
AAQVAEVVEAWTGIPTGRLLQGETAKLLDMEQAIGARLIGQADAVRAVSDAVRRARAGIS
DPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDDRAIVRIDMSEYAEKHSVARLVGAPPG
YVGYDEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNT
LLILTSNLGSQYLVDLTMDPAAQKEAVLGVVRQAFKPEFLNRLDEIVTFDALTRDDLAHI
VELQLRSLEARLAGRRITLAVTPEARAWLADAGYDPAYGARPLRRLVQTAIGDPLARMLI
GGEVADGGSVTVDRGDDGLVLTA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcggggccgacaagttcaccacccgtagccgcgaggcgatcgaggccgcc
cagcttgccgcgaccacggcgggcaacacgaccgtcgagcccatccacctgctcgtcgcg
ctgctgctgcagaacgacgggaccgcggccagcctggtcgcgaaggcgggcgtcgacgta
cctcagctcgtccacgcggcgtccgcggcgcgcgacgccctgccgcgggccagcggcgcg
accgtccagcagccctcgggctcggccgcgctcacccgcgtgctggcctcggcgctcgac
ctggcgcggtcgatgaaggacgactacgtcgcctcggagcacctgctcatcgcgctggcg
acggtcgagtcgagcgcgcgcaccgtgctgaccgacgccgggctgaccgaggaggggctg
cgcgcctccctcgcggccgtgcgcggcgaccggcgggtgaccagccaggacgccgaggac
acctacgaggcgctggagaagtactccgtcgacctcacctccgcggccgaggacggcaag
ctcgacccggtcatcggccgggaccaggagatccgccgggtgatccaggtgctgagccgg
cggaccaagaacaaccccgtgctcatcggcgagcccggcgtcggcaagaccgccgtcgtc
gagggcctcgcccagcgcgtggtcgcgggcgacgtccccgacagcctcaagggcaagcgg
gtgctgagcctcgacctgatgggcatggtcgcgggcgccaagtaccgcggcgagttcgag
gagcggctcaaggccgtcctcgacgagatcaagcaggccgagggcaaggtcatcacgttc
atcgacgagctgcacacggtcgtcggcgcgggcgccggcggcgacagccagatggacgcc
ggcaacatgctcaagccgatgctcgcccgcggtgagctgcacatgatcggtgccaccacg
ctcgacgagtaccgcgagtcgatcgagaaggaccccgccctggagcgccgcttccagcag
gtgttcgtgggggagccttcggtcgaggacaccatccagatcctgcgcggcatcctggag
aagtacgaggcccaccacggcgtccggatcaccgacgccgcgctcgtggccgccgcgacc
ctctccgaccgctacatcaccggccgccagctccccgacaaggcgatcgacctcgtcgac
gaggccgcgtcccggctgcgcatggagatcgagagcagccccgaggagatcgaccagctc
cgccgccaggtcgaccggctcaagatggaggagttcgcgctcgccaaggagtccgacgac
gcctcgcgcgagcggctcgacgtcctgcgccaggacctcgccgacaaggaggaggagctg
cgcgggctcgaggcccgctgggagcgggagaagtccgagctcgagggcgagggcgcgctg
cgccgccagctcgaccagctgcgtgtcgaggccgacaagctgacccgcgagggcaacctg
gccggcgccagcgaggtcctctacggccagatccctgccctggagcagcagatcaaggcc
gtcgaggcggtcgaggacgccgagccggtggccgagaagctcgtcggcgaggaggtcggc
gcggcccaggtcgccgaggtcgtcgaggcctggaccggcatccccacgggccgcctgctc
cagggcgagaccgccaagctgctcgacatggagcaggccatcggcgcccgcctgatcggt
caggccgacgcggtgcgcgccgtcagcgacgccgtacgacgggcgcgggccgggatctcc
gaccccgaccgcccgaccggctcgttcctgttcctcggtcccaccggtgtcggcaagacc
gagctcgccaagtcgctggccgacttcctgttcgacgacgaccgggcgatcgtccgcatc
gacatgagcgagtacgccgagaagcactccgtcgcgcgcctcgtcggtgcccctccgggc
tacgtcggctacgacgagggcggtcagctcaccgaggcggtgcgccggcgtccctactcg
gtcgtcctgctcgacgaggtcgagaaggcccaccccgaggtcttcgacatcctgctgcag
gtgctcgacgacggccggctgaccgacggccagggccgcacggtcgacttccgcaacacg
ctcctgatcctcacctccaacctgggctcgcagtacctcgtcgacctgacgatggacccc
gcggcgcagaaggaggcggtcctgggtgtcgtgcgccaggcgttcaagcccgagttcctc
aaccggctcgacgagatcgtcacgttcgacgcgctgacccgcgacgacctcgcgcacatc
gtcgagctccagctgcgctcgttggaggcccggctcgccggccggcggatcaccctcgcg
gtgacgccggaggcgcgggcctggctcgccgacgccggctacgacccggcctacggcgcc
cggccgctgcgccgcctggtgcagaccgcgatcggcgacccgctcgcgcggatgctcatc
ggcggcgaggtcgccgacggcggctcggtcacggtcgaccgcggcgacgacgggctcgtg
ctcaccgcctga
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