Nocardioides sp. WV_118_6: ABFU82_17010
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Entry
ABFU82_17010 CDS
T10638
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_17010
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
ABFU82_17010
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_30
FtsK_SpoIIIE
AAA_16
AAA
ResIII
AAA_10
CbiA
Hydrolase
T2SSE
AAA_6
Zeta_toxin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XBB65808
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Position
complement(3503679..3505370)
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AA seq
563 aa
AA seq
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MTQEQTPTPDAAPETAPAAAPETAPAAAPETAPAAAPETAPASTNPIEQAIAPGYAFEGP
ALELGGLMAGPDELTGSTIRIPLAMLNRHGLVAGATGTGKTKTLQLLAEQLSAAGVPVFA
ADIKGDLSGLATAGEANDKLLARTKSVGQEWTATGFPVEYYALGGQGIGIPIRVTVTSFG
PILLSRVLGLNDTQESSLGLVFHYADKQGLPLLDLSDLRAVVQHLTSDEGKADLKELGGL
SSATAGVILRELIGFADQGAEAFFGEPEFDSADLLQQAADGRGLINLVELPNLQDRPAIF
STFLMWLLADLFHDLPEVGDVDQPKLVFFFDEAHLLFKDASKPFLESIAQTVRLIRSKGV
GVFFVTQSPTDVPDDVLAQLGSRIQHQLRAHTPNDAKALKATVNTYPKSAYADLGEVITT
LGIGEAIVTVMGEKGAPTPVAWTRLRAPESLMAPSTTASMEATVKASPRATKYADVIDRE
SAREILAKKLEDGAKAAEAAEAAKSAPAGKSTGKSAPKAKKDDGGGAGEIVKDVVKSSAF
KQFMRTAAAEIARGMFGTARRRR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggagcagacgcccactcccgacgcagcacctgagaccgcacccgccgccgcg
cccgagaccgcaccggccgccgcgcccgagaccgcgccggccgccgcgcctgagaccgcg
cctgcgagcaccaacccgatcgagcaggcgatcgcgcccggctacgccttcgagggcccg
gccctcgagctcggcgggctgatggccggtcccgacgagctgaccggcagcaccatccgg
atcccgctcgcgatgctcaaccggcacggcctggtggccggcgccaccggtaccggcaag
accaagaccctccagctgctcgccgagcagctcagcgcggccggcgtcccggtcttcgcg
gccgacatcaagggcgacctgtccggcctggccaccgccggcgaggccaacgacaagctg
ctggcccgtaccaagtcggtgggccaggagtggacggcgaccggcttcccggtggagtac
tacgcgctgggcggccaggggatcggcatcccgatccgggtgaccgtgacgtccttcggg
ccgatcctgctgagccgggtgctggggctcaacgacacccaggagtccagcctgggcctg
gtcttccactacgccgacaagcagggcctgccgctgctcgacctgtccgacctgcgcgcc
gtcgtccagcacctgaccagcgacgagggcaaggccgacctcaaggagctcggcgggctc
tcgtcggcgaccgcgggcgtgatcctgcgcgagctgatcgggttcgccgaccagggcgcc
gaggcgttcttcggtgagcccgagttcgactccgccgacctgctccagcaggcggccgac
gggcgcgggctgatcaacctcgtcgagctgccgaacctccaggaccgcccggcgatcttc
tcgacgttcctgatgtggctcctcgccgacctcttccacgacctgcccgaggtgggcgac
gtggaccagcccaagctggtgttcttcttcgacgaggcgcacctgctgttcaaggacgcc
tccaagccgttcctcgagtcgatcgcccagacggtgcggctcatccggtccaagggggtc
ggcgtcttcttcgtgacgcagagcccgaccgacgtaccggacgacgtcctggcccagctc
ggctcgcggatccagcaccagctccgcgcccacacgcccaacgacgccaaggcgctcaag
gcgaccgtcaacacctaccccaagagcgcgtacgccgacctcggcgaggtgatcaccacg
ctcggcatcggcgaggcgatcgtgaccgtcatgggtgagaagggcgcgccgacgcccgtc
gcctggacccggctgcgcgcgcccgagtcgctgatggcgcccagcaccaccgcgtcgatg
gaggccacggtcaaggccagcccccgggccaccaagtacgccgacgtgatcgaccgcgag
tcggcccgtgagatcctcgccaagaagctcgaggacggcgccaaggcggccgaggcggcc
gaggcggccaagtccgcgccggccggcaagagcacgggcaagtccgcgcccaaggccaag
aaggacgacggcggcggggccggcgagatcgtcaaggacgtcgtgaagtcctcggccttc
aagcagttcatgcgcaccgcggcggccgagatcgcgcgcggcatgttcggtacggcgcgc
cgccgccgctga
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