Nocardioides sp. WV_118_6: ABFU82_17740
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Entry
ABFU82_17740 CDS
T10638
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03030
DNA replication
nocw03430
Mismatch repair
nocw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFU82_17740
03430 Mismatch repair
ABFU82_17740
03440 Homologous recombination
ABFU82_17740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_17740
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_17740
Enzymes [BR:
nocw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFU82_17740
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFU82_17740
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFU82_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
Mg_chelatase
AAA_18
AAA_5
AAA_16
AAA_19
AAA_28
nSTAND3
TsaE
zf-CXXC
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
XBB65947
LinkDB
All DBs
Position
complement(3652577..3654769)
Genome browser
AA seq
730 aa
AA seq
DB search
MDSPLALYRRYRPETFAEVIGQEHVTEPLRAALAGNRVNHAYLFSGPRGCGKTTSARILA
RALNCERAPISDPCGECESCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFAPVK
SRYKVYIIDEAHMVTTQGFNALLKLVEEPPPHLRFIFATTEPEKVIPTIRSRTHHYPFRL
IPPRLLTSYLTELCEREGVAMEPAALPLVVRAGAGSARDTLSVLDQLLGGAGPQGVTYEL
ASGLLGYTPDTLLDDVVSAFSAGDGSAVFGVVDKVIETGQDPRRFTEDLLRRLRDLVIIS
AVPDAAASGLLDVASDQADRLVAQATAFGRGELTRAADLVAAGLTDMRGATAPRLLLELI
CARILLPAADHTTEGVLARLDRLERRASISGTTSAEAAPAPAPAAVPAQDRPAPSRAERA
APELAEERPPAPAPAPAPAPVPAAAAPPPEPEPAPEPQPEPAPASAPAPPPEPAPTGSGL
TLVDVRRLWPSVIDRVKSVKRVTWIHLTQNSQVVGFNGSVLSLGFQNDGPRRSFETGGHA
EIVQQAVIDEIGANVRVEAIIDPGANPSAGPPPPAPAPAPTPAPAPATGPDAGASAGGWP
EVAATGPATPASSEPTPSAAPAQPPASTSAAAPAAAAPDNDPPPWATEPPPPDDGYPPDP
GPGPGPEPTPRRPRMADFQAQAQAQADAPPEDPDAHVNLDTDAEVDEESSAELLARELGA
QVIEEIPRGR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggactccccgctcgcgctctaccgccgctaccggcccgagaccttcgccgaggtgatc
gggcaggagcacgtcaccgagccgctgcgcgccgccctcgccggcaaccgggtcaaccac
gcctacctcttctccggcccacgcggctgcggcaagaccacgagcgcgcggatcctggcc
cgcgccctcaactgcgaacgtgccccgatctccgacccgtgcggtgagtgcgagagctgt
cgcgacctggcccgcaacggcccggggtcgatcgacgtgatcgagatcgacgccgcctcg
cacggtggtgtcgacgacgcgcgcgacctgcgcgagaaggcgttcttcgcgccggtcaag
agccgctacaaggtctacatcatcgatgaggcccacatggtcaccacgcagggcttcaac
gccctgctcaagctggtcgaggagccgccgccgcacctgcggttcatcttcgccacgacc
gagcccgagaaggtcatcccgaccatccgctcgcgcacccaccactacccgttccggctg
atcccgccgcggctcctgacgtcgtacctgaccgagctgtgcgagcgcgagggcgtggcc
atggagcccgcggcgctgccgctcgtcgtacgggcgggggcggggtcggcgcgcgacacc
ctctccgtgctcgaccagctgctcggcggtgccgggccgcagggcgtgacctacgagctg
gccagcgggctgctcggctacacgcccgacacgctcctggacgacgtcgtctcggcgttc
tccgcgggcgacggctcggcggtgttcggcgtggtcgacaaggtgatcgagaccggccag
gatccgcgccgcttcaccgaggacctgctgcgccggctgcgcgacctcgtcatcatctcc
gcggtgcccgacgccgcggcgtccggtctcctcgacgtcgccagcgaccaggccgaccgc
ctggtcgcgcaggccaccgccttcgggcgcggcgagctcacccgggccgccgacctggtc
gccgccgggctcaccgacatgcgcggggccaccgcgccgcggctgctgctcgagctgatc
tgcgcccggatcctgctccccgccgccgaccacaccaccgagggcgtcctcgcccgcctc
gaccggctcgagcgccgcgcctcgattagcggtacgacgtccgcggaggcggcgcccgcg
ccggccccggccgccgtaccggcgcaggaccggccggcgccctcgcgcgccgagcgggcc
gcgcccgagctcgccgaagagcggcccccggccccggccccggcaccggcacccgcaccc
gtgcctgctgccgcggcgcccccgccggagcccgagccggctcccgagcctcagcccgag
ccggcacccgcgtccgcacccgcgcccccgcccgagccggcgcccaccgggagcggcctc
accctcgtcgacgtccgccggctctggccgtcggtgatcgaccgggtcaagagcgtcaag
cgggtcacctggatccacctcacccagaactcccaggtcgtcgggttcaacggatccgtg
ctcagcctcggcttccagaacgacggaccgcgccgctcgttcgagaccggcgggcacgcc
gagatcgtccagcaggcggtgatcgacgagatcggcgccaacgtccgggtcgaggcgatc
atcgaccccggcgcgaacccgtccgcgggtccgccgcccccggcgcccgctcccgctccc
accccggccccggctcccgccaccgggccggacgccggtgcgtccgcaggaggctggccc
gaggtcgccgccaccggtccggcgacgcccgcgtcgtcggagcccaccccgtccgccgcc
cccgcccagccgccggcctcgacctcggccgccgcgcctgccgcagctgcccccgacaac
gacccgccgccgtgggccaccgagccgccgccgcccgacgacggctacccgcccgacccc
ggccctggtcccggcccggagcccacgccgcgccgcccccggatggccgacttccaggcc
caagcccaggcccaggccgatgccccgcccgaggaccccgacgcccacgtcaacctcgac
accgacgccgaggtcgacgaggagtccagtgcggagctcctcgcccgtgagctcggcgcc
caggtgatcgaggagatcccccgcggccgctga
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