Nocardioides sp. WV_118_6: ABFU82_18230
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Entry
ABFU82_18230 CDS
T10638
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_18230 (topA)
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_18230 (topA)
Enzymes [BR:
nocw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABFU82_18230 (topA)
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Topoisomerases
ABFU82_18230 (topA)
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABFU82_18230 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
XBB66038
LinkDB
All DBs
Position
complement(3758759..3761482)
Genome browser
AA seq
907 aa
AA seq
DB search
MSHKLVIVESPAKARTIGGYLGDGFVVESSIGHIRDLPNNAADTPAKIKDKPWGRLAIDV
EHDFTPYYIVPRDKKSHIAKLKQLLKDADELYLATDEDREGEAIAWHLLDELKPKGIPVK
RMTFNEITRAAIQAAAANTRDLDMDLVEAQETRRILDRLYGYEVSPVLWRKVMSGLSAGR
VQSVATRLVVDREKERMAFKVASYWDLEGTFDAGSAHDQRMFPAKLYSVDGTRVASGSNF
GQDGQLKARADVVHLDQRRAQALVSGLADSTYDVRSVESKPYRRSPYAPFRTTTLQQEAS
RKLGMSSSVTMSVAQRLYENGFITYMRTDSTTLSGSAIGAARAQVQELYGAEYLPDAPRT
YANKVKNAQEAHEAIRPAGDSFRTPAQTGLKGDQFRLYELIWMRTVASQMKDAVGQSVTI
RLGGAASTGEDVVFSASGRVITFHGFLKAYVEGTDDNAAKDDQETRLPNLHEGDRVSAAS
LSANGHETKPPARYTEATLIKELEEREIGRPSTYASIIGTILNRGYVYKKGTALVPAWIA
FSVIRLLQEHFSRLVDYDFTAGMETVLDDIAKGQKDRVSELSEFYYGSDRLEGLQPLVTG
LGDIDAKELATFPVGDEDDGIHLRVGKYGPYLEGPGDDGAAFAKRANVPEDLPPDELTVA
KAKELLANPAGEEIDLGVDPETGLQVVAKNGRFGPYVTEVLPEDAPKSAKPRTGSLFKSM
SLDTVTLSDAVKLLALPRVVGAGEDGEEITAQNGRYGPYLKKGTDSRSLTSEDQIFGITL
DEALKIYSQPKQRGRAAAAPPLKELGNDPVSGQPVVVKAGRFGEYVTDGEYNATLRKDDS
VEEITLERAAELLAERRAKGPAKKAAKKGAKKAAAKKTPAKKAAAKKTTTKKAAAKKAPA
KKAAKKA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccacaagttggtgatcgtcgagtcgccggcgaaggcccgcaccatcggcgggtac
ctcggcgacggcttcgtcgtcgagtcctccatcggccacatccgggatctcccgaacaac
gccgccgacaccccggccaagatcaaggacaagccgtggggtcggctggcgatcgacgtg
gagcacgacttcacgccgtactacatcgtcccgcgcgacaagaagtcccacatcgccaag
ctcaagcagctcctcaaggacgccgacgagctctacctcgccaccgatgaggaccgcgag
ggcgaggcgatcgcctggcacctcctcgacgagctcaagcccaagggcatcccggtcaag
cggatgaccttcaacgagatcacccgggcggccatccaggccgccgccgccaacacccgc
gacctcgacatggacctcgtcgaggcccaggagacgcgccgcatcctcgaccgtctctac
gggtacgaggtctcgccggtgctgtggcgcaaggtgatgtcgggtctgtccgccggccgc
gtccagtccgtcgcgacccggctcgtggtcgaccgcgagaaggagcggatggccttcaag
gtcgcctcctactgggacctcgagggcaccttcgacgccggctccgcgcacgaccagcgg
atgttcccggccaagctctacagcgttgacgggacgcgggtggcgagcggctcgaacttc
gggcaggacggccagctcaaggcgcgcgccgacgtcgtccacctcgaccagcggcgggcc
caggcgctcgtcagcggcctcgccgacagcacgtacgacgtccggtcggtcgagtccaag
ccctaccgtcgttccccctacgcccccttccgcacgaccacgctccagcaggaggccagc
cgcaagctcggcatgagctcgagcgtgacgatgtcggtcgcgcagcggctgtacgagaac
ggcttcatcacctacatgcgtaccgactcgacgacgctgtcgggcagcgccatcggggcg
gcgcgggcacaggtgcaggagctctacggcgcggagtacctccccgacgccccccgcacc
tacgccaacaaggtcaagaacgcccaggaggcgcacgaggcgatccgtccggcgggcgac
tcgttccgcacgccggcccagaccggtctcaagggcgaccagttccggctctacgagctg
atctggatgcgcaccgtcgcctcgcagatgaaggacgccgtcggccagtccgtcacgatc
cgcctcggcggcgcggcgagcaccggtgaggacgtcgtcttctccgcgtccggccgggtg
atcacgttccacgggttcctcaaggcctacgtcgagggcaccgacgacaacgcggccaag
gacgaccaggagacgcggctccccaacctgcacgagggcgaccgggtctcggccgcgtcg
ctgagcgccaacggtcacgagaccaagccgccggcccgctacaccgaggccacgctcatc
aaggagctcgaggagcgcgagatcgggcgcccgtcgacgtacgcgtcgatcatcgggacg
atcctcaaccgcggctacgtctacaagaagggcaccgcgctggtgccggcgtggatcgcg
ttctcggtgatccggctgctccaggagcacttctcgcggctggtcgactacgacttcacc
gcgggcatggagaccgtcctcgacgacatcgccaagggccagaaggaccgggtcagcgag
ctcagcgagttctactacggctccgaccgcctcgagggcctgcagccgctggtgaccggg
ctcggcgacatcgacgccaaggagctcgcgaccttcccggtcggcgacgaggacgacggc
atccacctgcgggtcggcaagtacggtccctacctcgagggccccggcgacgacggcgcg
gcgttcgccaagcgcgccaacgtgcccgaggacctcccgccggacgagctgaccgtggcc
aaggccaaggagctgctcgccaacccggccggcgaggagatcgatctcggcgtcgacccc
gagaccgggctgcaggtcgtcgccaagaacggccgcttcggtccctacgtcaccgaggtg
cttccggaggacgcgcccaagagcgccaagccgcgcaccggctcgctgttcaagtccatg
tcgctcgacaccgtcacgctcagcgacgcggtcaagctgctcgccctgccgcgcgtcgtc
ggcgccggtgaggacggcgaggagatcaccgcccagaacggccgctacgggccgtacctc
aagaagggcaccgactcgcgctcgctcaccagcgaggaccagatcttcgggatcacgctc
gacgaggcgctcaagatctacagccagcccaagcagcgcggccgggccgccgcggcgccg
ccgctcaaggagctgggcaacgacccggtctccgggcagccggtggtcgtcaaggccggc
cggttcggcgagtacgtcaccgacggtgagtacaacgcgaccctgcgcaaggacgactcg
gtcgaggagatcaccctcgagcgcgccgccgagctgctggccgagcgccgggccaagggc
cccgccaagaaggcggccaagaagggcgcgaagaaggccgccgcgaagaagacgccggcc
aagaaggcggctgcgaagaagacgaccaccaagaaggccgcggccaagaaggcgccggcc
aagaaggccgccaagaaggcctag
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