Nocardioides sp. WV_118_6: ABFU82_18790
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Entry
ABFU82_18790 CDS
T10638
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
nocw Nocardioides sp. WV_118_6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
XBB70373
LinkDB
All DBs
Position
complement(3881707..3888231)
Genome browser
AA seq
2174 aa
AA seq
DB search
MRSRISLLVLIALVITALQVAPGAPSAAGKDKPYVPAAQRYKPVPHSQAGRSWGRPPASG
TPKSVSKRGRLPSAWTVIQTAEPGKAAGIDQVDQAGAWDGAPLAGLRGAGRAGSDLDGRY
RVGLVDPKVAAKLGTPGLVFAVTAEEGSDTRAEFALDYDELARVGGNDWASRLQLVTLPG
CALTTPERPACQTQTPLADSVNDGTDREVSATLDDVLVGEVETPGAPADPADPTPSADPS
ARAAVPSSSANATVVAAVAGPGGSQGDYTASNLEPSGSWSHGGSSGSFNWSYPVTVTQPA
AGGVAPGVALAYNSAAVDGLSSNSNPQSSWTGLGFDYQPGYIERTFRNCKEVTPSSTDKG
LCWAGGDILTLRLPGGGTQALVVDSTTGKIRPEGDGGERIERLTGAQNGGQGGEYWRVTT
TDGTRYTFGANVLPGGTTAKATKSAWNVPVYGGTAADGCAAKRCTRTWRWNLDMVEDTHR
NVAAYYYANEVGYFVPSGTTTRTAYDRGGYLTRIDYGITNTSNSIYGVANPPNRVSFTVQ
ERCNPTGAITCTDAQFVVANSKNWPDVPVDQSCTATGGTCTINWPTFWTRKKLSNITASY
YSGTAYVNVDSYALAYTWSQSSSTQTLNLDRITRTATTAGQTLALPPVTFGYLTLDSRVK
GYKALPDMGYDRLTQIVAETGARTQVVYSDGANLPSLWCSVGNMPAAPDDNDRACYPVNW
VPPFQTSPTLDYFHKYAVMSVVEIDPNNLTPMQQTKYTYSSPGWHFDDNEVVKAARRTWS
QWRGYRTVETVTGDTNNNSPNGTSDQTTRSKTTYYLGMNGDRLSGGGNRNVEFTNSRGQQ
ITDTDAFAGMPAEIQGFDGATEVSNTRNTPDVLVTTATRNRSGLPDLKARVVQTVKTVDT
AVGTGAGATDLVKTTATTFVPASASETFIQRPDKVTVSATGGTGAATTTCTKTTYADNAT
TWVRNAPAELSVYAQNCDSGAELVSRSRSYYDGGAALGGANVSAGDVTKTETATRNDSGS
IRYATATATFDTAGRVKTQTVYPDGATVLTTARTTSYAYGTSAGGVLTDVTTTLPPMPGI
TGPVTTTRTLDPARGVPLKSTDAAGRITTATIDALGRYTAVWNPGRAQATQTASATYAYQ
FGTGAPLAVTSKVLVAPGNGDTPGYDTTVVILDSRGIPRQTQTDAPGGGRVITDSFVDSH
GWVVRTNDGWYTSGAPSSTVLTTADANIDSRTTTLYDRAGRTTKTQRWKGSAAQPETTTS
IIHGGDRTTVLPPSGAVATTTLVNGFGQTTELRRYTEPVTASSFASADSNRTTYSYAPTG
GVASMSTAAGTAKSATWTNTYDLLGRQVTADDPDSGVSTTSYDDAGSPTSTTDAAGRIVS
STYDSWGRPTARYAGSPASGRKTASWTYDTLVKGELTSTSSYVVDQASSQSRTYTNTVLG
YTPAGQPTGTELALDVPGLLPKYATRRTYNPTGLPATTTLAPTRDSAINQGMYFEKLTHW
YTPLGLEEGLTGDNAYLTGATYTPLREASQYVLGVNDATSALTYTRDPHNRWITNTLMTG
QFAQPQIQNVAATFDKVGNTTRVVDTQGPAGAPTQTTCYRYDSLQQLTDAWSATDSCAAN
PSDSVIGGVTPFWESWTHDAAGSRTTQTIHALPGSTADDAVTTYDNGVSGHPHALSSATT
SGSTASTDTGVVANIPSTQSATYTATGATDTITSPAGDMEFGYRDDGSLGTVTAPNGDTT
EYVNDVDGAHLLRIDRRGSTTETTLYLPGQQVTLSETSGSKTLATTRYYSLASGQQVAMR
KNENNPVFTLSDPHGTTQLTYAAFSSSTTPVIERRAFDPYGNPLGADEPEPWIDDRTFLN
KPENPVTDLVDMGARSYDPATGRFTSVDPLLNPADPTQANGYNYANNNPVTYSDPTGLYP
VCNGEPCVDSERDPKTGTWNMGKQPVQPKPVAGEVAGIQGKYPPVPKPAPRAPTYCTSTG
VCGLVAGHGEQNSQPKYPNAVKEVALALCSWVPFIGAACDAYDMKRTAEEDGVFSWQFGA
AIIGIAPFGDIAKGPKAIERMTDTGMAAEDALSGLKLGQKLARESADSVFTSSGRLSSGA
IAESRQIISGSDLGNPELIRRLTSDGTDIAQWGKYTTRTHQSPSGDFQVHFYMNGTTGEV
DYGYDYKIKFNGSR
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcacgcatcagcctgcttgtcctcatcgcgctggtgatcaccgcgctccaagtc
gcgccgggcgcgccgtcggcggcaggcaaggacaagccgtatgttccggctgcccagcgt
tacaagccggtcccgcacagccaggcgggcaggtcctggggccgtccccccgcctcgggt
acgccgaagtcggtgagcaagcgcggcaggctgccgagcgcctggacagtcattcagacc
gcagaacccggcaaggccgccggcatcgatcaggtcgaccaagctggcgcgtgggacgga
gcgccgctggcggggctgcgcggggctggccgggcgggttcggaccttgatggtcggtac
cgggtaggactcgtcgacccgaaggtcgccgcgaagctcggaactcctggtctggtgttt
gccgtgacggccgaggagggttcggacacccgagcggagttcgctctcgactacgacgag
ctcgcccgggtgggcggcaacgactgggcatcccgtctgcagctcgtgacgctaccgggg
tgcgccctgaccaccccggagcgtcccgcatgccagacgcagactccgctggccgacagc
gtcaacgatggaactgatcgtgaagtgtcggcgaccctggacgacgttctcgtgggcgag
gtcgagacgccgggtgccccggcggatcccgccgacccgactccgagcgctgaccccagc
gcacgcgcggctgtgcccagcagctcagccaatgccaccgtggtcgccgccgtggccggc
ccgggcggttctcagggcgactacacggcgagcaacctcgagccgtcgggttcgtggagt
catggtggctcgtccggcagcttcaactggagctacccggtgaccgtcacgcagcccgcg
gcgggcggagtcgctcccggagtcgccctcgcctacaactcggcggccgtcgacggactc
agctccaacagcaacccgcagtcgtcctggaccggactgggattcgactaccaacccggc
tacatcgagcggaccttccgcaattgcaaggaggtcacgccctcgtcgaccgacaagggc
ctgtgctgggcaggtggcgacatcctcacgctgcggttgcccggaggtgggacgcaggcg
ctcgtcgtcgacagcacgaccggcaagatccggcccgagggcgacggcggtgagcgcatt
gagcgcctcaccggtgcccagaacggcggtcagggcggggagtactggagggtgaccacc
accgacggcacccgctacaccttcggcgccaacgtcctgcccggtgggacgacggcgaag
gcgacgaagtcggcgtggaacgtgccggtctacggtggcaccgcggccgacggatgtgcc
gccaagcgatgcacccgtacgtggcggtggaatctcgacatggtcgaggacacccatcgc
aatgtcgccgcctactactacgcgaacgaggtcggctacttcgtcccgtctggcacgacg
acgcgcacggcgtacgaccgcggtggctacctcacccggatcgactacggcatcaccaac
accagcaactccatctacggggtcgccaacccgccgaaccgggtctccttcacggtccag
gagcggtgcaacccgacgggcgcgatcacctgcaccgatgctcagttcgtggtggcgaac
agcaagaactggccggacgtccccgtcgaccagagctgcactgcgaccggcggtacgtgc
accatcaactggcccacgttctggacccgcaagaagctgtcgaacatcaccgctagctac
tacagcggcaccgcctacgtgaacgtcgactcctacgctctcgcctacacgtggagccag
agctcctcgacgcagaccctgaacctggaccggatcacccggaccgcgacgaccgccggg
cagaccctcgccctgccgcccgtcacgttcggttacctgactctcgacagccgggtcaag
ggctacaaggcgctgcccgacatgggctacgacaggctcacccagatcgtcgccgagacc
ggggcgcggacgcaggtcgtctacagcgacggtgcgaaccttccctccctgtggtgctcg
gtgggcaacatgcccgcggcgcccgacgacaacgaccgtgcgtgctacccggtcaactgg
gtgcctcccttccagacgtcgcccacgctcgactacttccacaagtacgccgtgatgtcg
gtcgtcgagatcgatcccaacaacctgacgccgatgcagcagacgaagtacacctacagc
agccccgggtggcacttcgacgacaacgaggtcgtcaaggcggcccgtcgtacgtggtcg
cagtggcgtggctatcgcacggtcgagacggttaccggtgataccaacaacaactcgccc
aacggcaccagcgaccagaccacgcgctcgaagaccacctactacctgggcatgaacgga
gaccggctctcgggcggcggcaaccgcaacgtcgagttcaccaactcgcggggacagcag
atcaccgacaccgacgccttcgccggcatgcccgccgagatccagggcttcgatggcgcg
acggaggtctccaacacgcgcaacacccccgacgtgctcgtgaccactgccactcgcaac
cgcagtggactgccggacctcaaggctcgcgtcgtccagaccgtcaagacggtggacacc
gcggtcggcaccggtgctggcgctaccgatctggtcaagaccacagcaacgacgttcgtg
cctgcgtcggcgtctgagaccttcatccaacggccggacaaggtgaccgtcagcgccacg
ggcggtaccggcgctgcgaccacgacctgcaccaagaccacctacgcagacaacgccacg
acgtgggttcgcaatgcgcccgctgagctgtcggtctacgcgcagaactgtgactctggc
gcagagctggtctctcgcagtcgttcgtactacgacggaggtgccgcgctggggggcgcc
aatgtcagcgccggtgacgtgacgaagacggagaccgccacgcgcaacgacagcgggagc
atccgctacgccaccgcgacagcgacctttgacacggctggccgggtcaagacacagacg
gtctacccggatggggccaccgtgctgacgacggctcggacgacttcgtacgcctacggc
acgagcgccggcggcgtgctcaccgatgtcacgacgaccctgccgcccatgcccggaatc
accggaccggtcacgaccacgcggacactcgaccctgcgcgaggcgtcccgctcaagtcg
accgatgccgcggggcgcatcaccacggcgacgatcgacgcgctcggccggtacacggcc
gtctggaatcccggacgagcacaggcaacgcagaccgcctctgccacgtacgcctaccag
ttcggcaccggtgcgccgcttgctgtgacgagcaaggttctcgtcgctcccggcaacggc
gacactcctggatacgacacgaccgtcgtcatcctcgactcacgaggaatcccgcggcag
acccagaccgacgccccaggaggggggcgagtgatcaccgactccttcgttgactctcat
ggctgggtggtgcgcaccaacgacggctggtacacgtcgggcgctccgtcttccaccgtt
ctcacgacggctgacgcgaacatcgactcccgcacgaccacgctctacgaccgggcgggc
cggacgacgaagactcagcggtggaagggatctgcggcccaaccggagaccaccaccagc
atcatccatggcggggaccgcaccactgtgctgcctcccagcggcgcggtcgcgacgacc
accctggtcaacggcttcggccagacgacggagctgcgccggtacaccgagccggtgacg
gcctcgtccttcgccagcgcggacagcaaccggacgacgtactcctacgctccgacaggc
ggcgtggcatcgatgtcgacggccgcggggacggcgaagagcgcgacctggacgaacacc
tacgatctcctcggccgccaggtcaccgccgacgatcccgacagtggcgtgtccacgacc
agctatgacgatgccggttcaccgacatcgacgacggacgctgcggggcgcatcgtctcc
tcgacctacgactcgtgggggcgtccgaccgcccgatatgcgggttcccccgcctcggga
cgcaagaccgcgtcctggacgtacgacaccttggtcaagggcgagctcacctccaccagc
tcctacgtggtggaccaagccagcagccagagtcggacttacaccaacacggtcctcggc
tacacgccggcgggacaaccgacgggcacggagctggcgctcgacgtccccgggttgctc
ccgaagtacgcgacccgtcgtacctacaaccccactggcctgcccgcgaccaccacgctg
gcgcccacgcgtgactcggcgatcaaccaggggatgtacttcgagaagctcactcactgg
tacacccccctcggcctcgaggaaggcctgacgggagacaacgcctatctcaccggcgcc
acctacacgccgctccgcgaggcgagccagtacgtcctcggcgtcaacgacgccaccagt
gcgctcacctacacccgtgatccgcacaaccggtggatcaccaacaccttgatgacgggc
cagttcgcccagccgcagatccagaacgtcgccgcgacgttcgacaaggtcggcaacacc
acccgtgtcgtcgacacccagggtccggccggcgcgcccacgcagaccacctgctaccgc
tacgacagcctgcagcagctcaccgacgcctggagcgcgactgacagctgcgccgcgaac
ccttcggactccgtgatcgggggagtgaccccgttctgggagtcgtggacccacgacgct
gccggctcacgtacgacgcagacgatccacgcgctgccggggagcactgctgacgacgcc
gtcacgacgtacgacaacggcgtcagcggacatccgcatgcgctgagttcggcaacgacc
tcaggcagtacggcaagcaccgataccggggtcgtcgccaacatcccgtcgacgcagagc
gcgacgtacacggcgacgggtgccaccgacaccatcacgtcgcctgcgggagacatggag
ttcggctatcgagacgacggcagtctgggcaccgtcaccgcgcccaacggtgacacgacg
gagtacgtcaatgacgtcgatggtgcgcacctgctgcggatcgatcgtcggggcagcacg
acggagacgacgctctaccttccgggccagcaggtcacgctgagtgagacgagcgggagc
aagaccctcgctacgaccaggtactactcccttgcgtctggccagcaggtcgccatgcgc
aagaacgagaacaacccggtcttcacgctctccgacccgcacggcaccacccagctgacc
tatgccgcgttcagctcctcgaccacaccggtgatcgaacgccgtgccttcgacccgtac
ggcaacccgctcggtgccgacgagcccgaaccgtggatcgacgaccggaccttcctcaac
aagcccgagaacccggtcaccgacctggtggacatgggtgctcgctcgtacgacccggcc
accggccgcttcaccagcgtcgacccgctgctcaaccccgcggacccgacgcaggccaac
ggctacaactacgcgaacaacaaccccgtcacgtactccgatccgacgggcctgtatccc
gtgtgcaatggggagccgtgcgtcgattccgagcgcgaccccaagactggcacctggaac
atgggcaagcagcccgttcagccgaagccggtggcgggcgaggttgcagggattcaggga
aagtacccgccggtgccgaagccggcaccgagggcgccgacctactgcacgtcaactgga
gtctgtggtctcgtcgctggccacggcgagcagaactctcagcccaagtaccccaacgcg
gtcaaggaagtggcgctcgccctctgctcgtgggtgccgttcatcggcgctgcctgtgac
gcctacgacatgaagcgaacggctgaggaagacggcgtcttctcttggcagttcggcgca
gccatcatcgggatcgcgccgttcggtgacatcgcgaagggcccgaaagcgatcgaacgc
atgaccgacactggcatggctgccgaggacgcgctcagtggtttgaaactaggacagaag
cttgcgcgtgagtcagctgattcggtgttcacatcgtccgggcgcctgagttcaggggcg
attgccgaatcacgacagatcatctcggggagcgatctgggcaaccctgagttgatcagg
cgcctgacctcggatggcaccgatatcgcccaatggggcaagtacacgactcggacccac
cagagtccctccggcgactttcaggttcacttctacatgaatgggacgacaggcgaggtc
gactacgggtacgactacaagatcaagttcaacgggagtcgctag
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