Nocardioides sp. WV_118_6: ABFU82_19835
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Entry
ABFU82_19835 CDS
T10638
Name
(GenBank) penicillin-binding protein 2
KO
K05364
penicillin-binding protein A
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00550
Peptidoglycan biosynthesis
nocw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABFU82_19835
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nocw01011
]
ABFU82_19835
Peptidoglycan biosynthesis and degradation proteins [BR:
nocw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ABFU82_19835
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
XBB66345
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Position
4105041..4106570
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AA seq
509 aa
AA seq
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MNKPIRTVSIFCMFLFLALMANVTYVQFWKAEDYNTDPRNARVAEASFSRERGQILVGDE
PVATSRPSDDRYKYLRVYPASGARMFAPITGYLQLGSQTGIERSQNAVLTGEDPQLFVTR
LVDLLKGDQTQGGNVVLTLNAAAQKAAFEGLRDTLGPRGEGSVVAIQPKTGRVLAMASYP
SYDPNELATHDFKSAASAYERLDKDPRDPLVNRAIQTRLFPGSTFKLVTAAAAIESGKYH
GDDQVPAGATYQAPGTTRTIGNDGRSQCNPSKISFATALDWSCNTTFAHLAVEVGPEKMR
EQSEKFGFNSNYLLDLKGQAQSVYPTGVPLSEKDGGGTRELSDAETAQTGIGQFEVQSTP
LQMAMVTAAIANQGTLMRPYLVEQVQTAGFDVLRTTEPDKLNDAVSPQTARELTDLLVSV
VDNGTASPAAIPGVKVAGKTGTAQRTSTRCSAGGKPPYAWFVSYAPADNAEVAVAVMIEE
APDRACNEIAGGQLGGPIAKAVMEAVLKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccgatccgcacggtctcgatcttctgcatgttcctcttcctcgcgctgatg
gcgaacgtgacctacgtgcagttctggaaggccgaggactacaacaccgacccgcgcaac
gcccgggtcgccgaggcgtcgttcagccgcgagcgcggccagatcctggtcggcgacgag
ccggtcgcgaccagccggccctccgacgaccgctacaagtacctgcgcgtctacccggcc
tcgggcgcccggatgttcgcgccgatcaccggctacctccagctcggcagccagaccggc
atcgagcgcagccagaacgccgtgctcaccggcgaggacccccagctgttcgtgacccgg
ctcgtcgacctgctcaagggcgaccagacccagggcggcaatgtcgtgctgaccctcaac
gcggcggcccagaaggccgccttcgagggactgcgcgacaccctcggcccgcgcggcgag
ggctcggtcgtggcgatccagcccaagaccgggcgggtgctggcgatggcgtcctacccg
tcgtacgaccccaacgagctggccacccacgacttcaagagcgcggcctcggcctacgag
cgcctcgacaaggacccgcgcgacccgctggtcaaccgggccatccagacccggctgttc
ccgggctcgaccttcaagctcgtcaccgccgcggcggcgatcgagagcggcaagtaccac
ggcgacgaccaggtcccggccggggcgacgtaccaggcgccggggaccacgcgcaccatc
ggcaacgacggccgcagccagtgcaacccgagcaagatctcgttcgcgacggcgctcgac
tggtcgtgcaacacgaccttcgcgcacctcgccgtcgaggtcgggcccgagaagatgcgc
gagcagtccgagaagttcggcttcaacagcaactacctgctcgacctcaagggccaggcc
cagtcggtctacccgaccggcgtccccctcagcgagaaggacggcggcggcacccgcgag
ctcagcgacgccgagaccgcgcagaccggcatcggccagttcgaggtccagtcgacgccg
ctccagatggccatggtcaccgccgcgatcgccaaccagggcacgctcatgcggccctac
ctggtcgagcaggtgcagaccgccggcttcgacgtgctgcgcaccaccgagcccgacaag
ctcaacgacgcggtctcgccccagaccgcccgtgagctgaccgacctgctcgtctcggtc
gtcgacaacggcaccgcctcgcccgcggcgatccccggcgtcaaggtcgccggcaagacc
ggtaccgcgcagcgcacctccacccggtgctcggcgggcggcaagcccccctacgcgtgg
ttcgtctcgtacgccccggcggacaacgccgaggtggccgtggccgtcatgatcgaggag
gcgcccgaccgggcgtgcaacgagatcgccggcggccagctcggcggcccgatcgccaag
gcagtgatggaagcggtgctcaagaagtga
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