Nocardioides sp. WV_118_6: ABFU82_20065
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Entry
ABFU82_20065 CDS
T10638
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_20065 (gyrA)
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_20065 (gyrA)
Enzymes [BR:
nocw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABFU82_20065 (gyrA)
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Topoisomerases
ABFU82_20065 (gyrA)
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABFU82_20065 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
XBB66387
LinkDB
All DBs
Position
complement(4160718..4163417)
Genome browser
AA seq
899 aa
AA seq
DB search
MTETQSNLGDGAGGGRIEPIDLQESMKRSYIDYAMAVIVGRALPDVRDGLKPVHRRVLYA
MYDGGYRPDRGFNKCARVVGDVMGNYHPHGDSAIYDTLVRLAQPWVMRNPLVNGQGNFGS
PGNDPAAAMRYTECRMAPLAMEMVRDIDEDTVDMTPNYDGKTEEPTILPARFPNLLVNGS
AGIAVGMATNIPPHNLREVAEGATWALEHPDATRVELQEALLERIKGPDFPNGAMIVGRE
GIEQAYRTGRGSITQRAVIEVDEEKSGRTVLVITDLPYMVNPDNLLVKIAELADAGKVQG
ISDVRNETSSRVGQRIVVVLKRDAVARVVLNNLLKHTELQTNFSANMLALVDGVPRTLTI
DQFISNWVEHQIDVIRRRTEFRLRKAEADAHIWRGLVKALDMLDDVIALIRRSPEVEDAR
RGLIELLDIDEVQANAILDMQLRRLAALERQKIIDRLAELEIVIADLKDILANVSRQRQI
VIDELGEIVAKYGDDRRTQIIAAAGDMSMEDLIPDEDQVVSITRGGYAKRTRADQYRTQK
RGGKGVRGASLRGDDVVDHFISTTSHHWLLFFTTAGRVYRTKVYNLPEASRDAKGGHVAG
LLSFQPDESIAQVLAIRDYEQAPYLVLATRSGLIKKTRLGDYNSPRQAGVIAINFREDDD
ELIGAELVDGDDHILLVSRKGQAIRFPADDSQLRPMGRATSGVTGMKFRDGDALLSMSVI
RAADVAHEESDADVQYVFTITDGGFAKRTRISEYRLQSRGGIGIKAMALANEDRGVLVGA
FIVVDGDEILSITQSGQVVRSPINDDFRPTGRSTQGVKFVSPKKGDAVAVVARSVEAKDA
DEEEGAEGATEPGAEPGTQPGAEATESPVQGSDATIVESDDPGTGETGTSVDESGESES
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagacgcagagcaacctcggcgacggcgccggcggcgggcggatcgagcccatc
gacctgcaggagtcgatgaagcgctcctacatcgactacgcgatggccgtcatcgtcggc
cgcgcgcttcccgacgtacgcgacgggctcaagccggtccaccgccgggtcctctacgcc
atgtacgacggcggctaccgccccgaccgcggcttcaacaagtgcgcccgcgtcgtcggc
gacgtgatgggcaactatcacccccacggcgactcggcgatctacgacaccctggtccgc
ctcgcgcagccgtgggtgatgcgcaacccgctggtcaacggccagggcaacttcggctcg
ccgggcaacgacccggccgcggcgatgcggtacaccgagtgccggatggcgccgctggcc
atggagatggtccgggacatcgacgaggacaccgtcgacatgaccccgaactacgacggc
aagaccgaagagccgaccatcctgccggcccggttccccaacctgctcgtcaacggctcg
gccggcatcgcggtcggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgcc
gagggcgccacctgggccctcgagcaccccgacgccacccgcgtcgagctccaggaggcg
ctgctcgagcggatcaagggccccgacttccccaacggcgccatgatcgtgggccgcgag
ggcatcgagcaggcctaccgcaccggtcgcggctcgatcacccagcgcgcggtcatcgag
gtcgacgaggagaagtcgggccgcacggtcctggtgatcaccgaccttccctacatggtc
aaccccgacaacctgctcgtgaagatcgccgagctcgccgacgccggcaaggtccagggg
atcagcgacgtccgcaacgagacgtcatcgcgcgtgggccagcgcatcgtcgtcgtgctc
aagcgcgacgccgtggcgcgcgtcgtcctcaacaacctgctcaagcacaccgagctgcag
accaacttcagcgccaacatgctggcgctcgtcgacggcgtcccgcggaccctgaccatc
gaccagttcatcagcaactgggtcgagcaccagatcgacgtcatccggcgtcgtaccgag
ttccggctgcgcaaggccgaggccgacgcccacatctggcgcggtctggtcaaggcgctc
gacatgctcgacgacgtcatcgccctcatccggcgctcgcccgaggtcgaggacgcccgc
cgcggcctgatcgagctgctcgacatcgacgaggtccaggccaacgcgatcctcgacatg
cagctgcggcgcctggccgccctcgagcggcagaagatcatcgaccggttggccgagctc
gagatcgtcatcgccgacctcaaggacatcctcgccaacgtcagccggcagcggcagatc
gtgatcgacgagctcggcgagatcgtcgcgaagtacggcgacgaccgtcgtacccagatc
atcgcggcggccggcgacatgtcgatggaggacctgatccccgacgaggaccaggtcgtc
tcgatcacccgcggcggctacgccaagcgcacccgcgccgaccagtaccgcacccagaag
cgcggcggcaagggcgtccgcggcgcctcgctgcgcggcgacgacgtggtcgaccacttc
atctcgaccacctcgcaccactggctgctgttcttcaccacggccggccgggtctaccgg
accaaggtctacaacctgccggaggcctcgcgcgacgccaagggcggccacgtcgccggc
ctgctgtcgttccagccggacgagtcgatcgcccaggtgctcgccatccgcgactacgag
caggcgccgtacctggtgctcgccacgcgcagcggcctgatcaagaagacccgcctgggc
gactacaacagcccgcgccaggccggcgtcatcgcgatcaacttccgcgaggacgacgac
gagctgatcggcgccgagctggtcgacggcgacgaccacatcctgctcgtctcccgcaag
ggccaggcgatccgcttccccgccgacgacagccagctgcgcccgatgggccgggcgacg
tccggcgtcaccggcatgaagttccgcgacggcgacgccctgctctcgatgtcggtcatc
cgcgcggccgacgtcgcgcacgaggagtccgacgccgacgtccagtacgtcttcaccatc
accgacggcggcttcgccaagcgcacgcgcatctccgagtaccgcctccagtcgcgcggc
ggcatcggcatcaaggcgatggccctggccaacgaggaccgcggcgtcctggtcggcgcc
ttcatcgtcgtcgacggcgacgagatcctctccatcacccagtccggccaggtcgtccgc
agccccatcaacgacgacttccgcccgaccggccgctccacccagggcgtgaagttcgtc
agccccaagaagggcgacgccgtcgccgtcgtggcccgctccgtcgaggccaaggacgcc
gacgaggaggagggcgccgagggcgccaccgagccgggcgccgagccgggcactcagccg
ggtgccgaggcgacggaatcgccggttcagggttcggatgccacaatcgttgaatcggac
gacccgggcacgggcgagaccgggacgtccgtggacgagtccggagagagtgagagctga
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