Nocardioides sp. WV_118_6: ABFU82_20070
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Entry
ABFU82_20070 CDS
T10638
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_20070 (gyrB)
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_20070 (gyrB)
Enzymes [BR:
nocw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABFU82_20070 (gyrB)
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Topoisomerases
ABFU82_20070 (gyrB)
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABFU82_20070 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Portal_Mu
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XBB66388
LinkDB
All DBs
Position
complement(4163469..4165553)
Genome browser
AA seq
694 aa
AA seq
DB search
MSTDDQSLEPESPEYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLIWEIVDNAVDEA
LAGYCDTIKVTLNPDGSVSVADNGRGIPTDTAPGQELPAATLALTVLHAGGKFGGGGYKV
SGGLHGVGSSVVNALSTRLRLEIKNRGYLWEQDFSLGVPDFDLRQVRPLEEGERTGTTVT
WFASDDIFETTDYTLETISTRFREMAFLNKGLRIELRDARPKAEDLADAVEDGTVDEAAG
VAAAASAVHAVDVDGHKALEQVFQYERGLADYVDFLNRSKTPISSIIAFEDQTADDAANP
MSLEIAMQWQASSYNESVHTFANTINTPEGGTHEEGFRAALTSLVNRWGEEWGLIKKKED
RLTGDDIREGLTAIISLKISEPQFEGQTKAKLGNTEAKGFVQSAVNDELGAWLEQNPNEG
KEIIRKAQAAATARIAARKARDLARNRKGLLGGGGLPGKLRDCSSRNPEECEVFIVEGDS
AGGSAVMGRENRIQAILPIRGKILNVEKARIDKVLANQEVQAIISALGTGVHEEFDLDKL
RYHKIVLMADADVDGHHINTLLLTLLFRFMRPLIEAGHVYLAQPPLYRIKWNKPAEHEYV
YSDAERDAVMRDGLEQGKKLPKEAPIQRYKGLGEMNADELWETTLDPDQRVLLQVNLEDA
AQADEIFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactgacgaccagtccctcgagccggagtccccggagtacgacgcgtccgccatc
caggtcctcgagggtctcgaggcggtccgcaagcgacccggcatgtacatcggctcgacc
ggtgagcggggcctgcaccacctgatctgggagatcgtcgacaacgcggtggacgaggcg
ctcgccggctactgcgacacgatcaaggtgaccctcaaccccgacggctcggtgagcgtg
gccgacaacggccgtggcatcccgaccgacaccgcgcccgggcaggagctgcccgccgcg
acgctggcgctgaccgtgctccacgcgggcggcaagttcggcggcggcggctacaaggtc
tccggcggtctgcacggcgtcggctcgtcggtggtcaacgcgctctcgacccgactgcgg
ctggagatcaagaaccgcggctacctctgggagcaggacttctccctcggcgtgcccgac
ttcgacctgcgccaggtgcgccccctcgaggagggcgagcgcaccggtacgacggtcacc
tggttcgcctcggacgacatcttcgagaccaccgactacaccctcgagacgatctcgacc
cggttccgcgagatggccttcctcaacaagggcctgcggatcgagctgcgcgacgcccgg
cccaaggccgaggacctcgccgacgcggtcgaggacggcaccgtcgacgaggcggccggc
gtcgcggcggcggcgtctgccgtccacgcggtcgacgtcgacgggcacaaggcgctcgag
caggtcttccagtacgagcgcggcctggccgactacgtcgacttcctcaaccgcagcaag
accccgatcagctcgatcatcgccttcgaggaccagaccgcggacgacgcggccaacccg
atgagcctcgagatcgccatgcagtggcaggcgtcgtcgtacaacgagtcggtgcacacc
ttcgccaacacgatcaacacccccgagggcggcacccacgaagagggcttccgcgccgcg
ctcacctcgctggtcaaccggtggggcgaggagtggggcctgatcaagaagaaggaggac
cggctgaccggtgacgacatccgcgagggtctcaccgcgatcatcagcctcaagatctcc
gagccgcagttcgagggccagaccaaggccaagctcggcaacaccgaggccaagggcttc
gtgcagtcggccgtcaacgacgagctcggcgcctggttggagcagaaccccaacgagggc
aaggagatcatccgcaaggcccaggccgcggccaccgcgcgcatcgccgcgcgcaaggcg
cgcgacctggcccgcaaccgcaagggcctgctcggcggcggcggtctcccgggcaagctg
cgcgactgcagctcgcgcaaccccgaggagtgcgaggtcttcatcgtcgagggcgactcg
gccggcggctcggccgtcatgggccgggagaaccggatccaggcgatcctcccgatccgc
ggaaagatcctcaatgtcgagaaggcgcgcatcgacaaggtcctggccaaccaggaggtc
caggcgatcatctccgcgctcggcacgggtgtgcacgaggagttcgacctcgacaagctg
cgctaccacaagatcgtgctgatggccgacgccgatgtcgacggccaccacatcaacacg
ctcctgctgacgctgctgttccgcttcatgcgtccgctgatcgaggccggccacgtctac
ctcgcccagccgccgctctaccggatcaagtggaacaagccggccgagcacgagtacgtc
tactccgacgccgagcgcgacgcggtcatgcgcgacggcctcgagcagggcaagaagctg
cccaaggaagcaccgatccagcgctacaagggtctgggcgagatgaacgccgacgagctg
tgggagaccacgctcgaccccgaccagcgcgtcctgctgcaggtcaacctcgaggacgcg
gcccaggccgacgagatcttctcgatcctcatgggcgaggacgtcgagcagcggcgctcg
ttcatccagcgcaacgccaaggacgttcgcttcctcgatatctag
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