Nocardioides sp. WV_118_6: ABFU82_20320
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Entry
ABFU82_20320 CDS
T10638
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU82_20320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_20320
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ABFU82_20320
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABFU82_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XBB70385
LinkDB
All DBs
Position
complement(4217863..4218651)
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AA seq
262 aa
AA seq
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MRIGAHVDQTDPIAEAAARNAPLVQFFLGNPQSYKGPVLSYEGGAEALRGAAEGAGVDLY
VHAPYLINVATTNNRQRIPSRKLLQQHMDAAAELGAKGLIVHGGHVTDEDDPAKGFDNWR
KAIEATDLKIPLLIENTAGGTNAMTRYLDRIKGTWDAIAAAEGADMVGFCLDTCHAHAGG
NALETIVDDVRAITGRIDLVHANDSRDEFDSGADRHANFGAGRIDPDLLAQVIRDAGAPV
VCETPGGADEHVADFAWLRERL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ctgcgtatcggtgcccacgtcgaccagaccgacccgatcgccgaggcggccgcccgcaac
gccccgctcgtgcagttcttcctcggcaacccgcagtcctacaagggccccgtcctgtcc
tacgagggcggcgcggaggccctgcgcggcgcggccgagggggccggcgtcgacctctac
gtgcacgcgccgtacctgatcaacgtggcgacgaccaacaaccgccagcgcatccccagc
cgcaagctgctccagcagcacatggacgccgccgccgagctcggcgccaagggactgatc
gtccacggcggccacgtcaccgacgaggacgacccggccaagggcttcgacaactggcgc
aaggccatcgaggcgaccgacctcaagatcccgctgctcatcgagaacaccgcgggcggc
accaacgcgatgacccgctacctcgaccggatcaagggcacctgggacgccatcgccgcg
gccgagggcgccgacatggtcggcttctgcctcgacacctgccacgcccacgccggcggc
aacgcgctcgagacgatcgtcgacgacgtccgcgcgatcaccggccggatcgacctggtc
cacgccaacgacagccgcgacgagttcgactccggcgccgaccggcacgccaacttcggc
gccggccggatcgaccccgacctgctggcccaggtgatccgcgacgccggtgccccggtc
gtgtgtgagacgcccggcggagccgacgagcacgtcgccgacttcgcctggctgcgcgag
cggctctga
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