Nocardioides sp. WV_118_6: ABFU82_23255
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Entry
ABFU82_23255 CDS
T10638
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFU82_23255 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_23255 (recC)
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABFU82_23255 (recC)
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFU82_23255 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XBB66998
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Position
4777479..4780871
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AA seq
1130 aa
AA seq
DB search
MTLHLHRAARTDLLADELGGLLATPLDDPFASEVVVVPARGVERWLTQRLSHRLGTGARG
GDGVCAGVRFLQPASLVGLLLGRERDDPWHPDRLVWPLLATIDDVLGEPWCATLATHLGH
GLDGEEGELRRSRRWSVARRLAERFTSYAVQRPALVRDWREGRDTDGTGEQLADDLRWEA
ELWRRLLARMAAAGHTEAPDQRHERVCATLRAGGADGLDLPGRLSLFGHTRLPATEVDLL
VALAAHRDVHLWLSQPSAALWDAVTAAGVPVGPRDTCGSAELAEHPLLASLGRDSRELAT
VLGARVRAGEADDAGTAPDPVPPADLLGWLQSDLRANQAPDEATRAGRVLAVDDRSVQVH
ACHGPARQIEVLRELLVGLLEDDPTLEPRDIVVMCPDIETYAPLFSAGFGLGDLIGDERT
DDALHPAHRLRVRLADRAASSTNPLLGVAVALVELAGGRATASQVLDLLSRPVCRRRFGF
GDDDLARMTRWVAEAGIRWGVDAGHRASYAMEGFEHNTWRAGLDRLLLGVAMSDDDHRHV
GRGLPVDDIASGEIELVGRLSEAVARLAGCLDALGRAEAADAWFAAIADGVRDLCEVDAD
DAWQLPQFERELARARASADESDPGVPLRLADVRALLQARLAGRPTRANFRTGMLTVSTL
VPMRSVPHRVVCLVGLDDGVFPRTSGVDGDDVLARRPLVGERDLRGEDRQLLLDAVLAAG
ERLIITYTGAAEHTGQERPPAVPLGELVDALDRTAATPARPVVVVRHPLQAFDPRNHTAG
ALVGAGAFSFDRASLAGARAAVRERTAPPPFLADPLPPAPASAGDVTLADLVGFVHRPAR
TFLRRRLDVATPFEPDQVADAIPVALNGLEVWQIGDRLLREVLAADDPAATATAVMTAEQ
LRGSLPPFDLGRAALTDVVKECQELFARSAALRAGTPRTVDVDVDLGGGRRLTGTVPRVH
GNQVVSLSYSRLKPKQRLASWLDVLALTATHPDENWTGHAVARAKAGPQRALVGPLDHRA
TEWLHALVALYDEGLTRPLPMPLDTAYAWADAHAKELRGMDADPVEAAARAWVTDPFNQW
GIKGEDDDPAHRRVYGHSAPVTALVDAGLASYAWTVWEPLLAGAEKVGHL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcacctccaccgcgccgcgcggaccgacctgctcgccgacgagctcggcggg
ctgctcgcgacgccgctggacgacccgttcgccagcgaggtcgtcgtggtgccggcgcgc
ggggtcgagcggtggctcacccagcggctctcgcaccggctcggcacgggcgcgcgtggg
ggcgacggggtgtgcgcgggggtgcgcttcctccagccggcctcgctggtcgggctgctg
ctggggcgcgagcgggacgacccgtggcacccggaccggctggtctggccgctgctggcg
acgatcgacgacgtgctcggtgagccgtggtgcgcgacgctggcgacccacctcgggcac
gggctcgacggcgaggagggcgagctgcggcgcagtcgccggtggtcggtcgcgcggcgg
ctggccgagcgcttcacgtcgtacgccgtccagcgcccggcgctcgtgcgcgactggcgc
gaggggcgcgacaccgatggcaccggcgaacagctggccgacgacctgcgctgggaggcc
gagctgtggcgccggctgctcgcgcggatggccgcggccgggcacaccgaggcgcccgac
cagcgccacgagcgggtgtgcgcgacgctgcgcgcgggtggggccgacggcctcgacctg
ccggggcggctctcgctgttcgggcacacccggctgccggcgaccgaggtcgacctgctg
gtcgcgctcgcggcccaccgcgacgtccacctctggctgtcccagccgtccgcggcgctc
tgggacgcggtgaccgcggccggcgtcccggtcggcccgcgcgacacctgcggctccgcc
gagctggccgagcacccgttgctcgcctcgctggggcgcgactcccgcgagctggccacc
gtcctcggggctcgggtgcgcgccggtgaggccgacgacgccggtacggcgcccgacccg
gtgccgcccgccgacctgctcggctggctccagtccgacctgcgcgccaaccaggcgccc
gacgaggccacccgcgccgggcgggtgctggccgtggacgaccggtcggtccaggtccac
gcctgccatggtccggcccgccagatcgaggtgctgcgcgagctgctcgtcggtctgctc
gaggacgacccgacgctcgagccgcgcgacatcgtcgtgatgtgccccgacatcgagacc
tacgcaccgctcttctcggccggcttcggcctcggggacctgatcggtgacgagcgcacc
gacgacgcgctccatcccgcgcaccggctgcgggtccggctcgccgaccgtgccgcgagc
agcaccaacccgctgctgggcgtggcggtcgcgctcgtcgagctggccggtggccgggcg
accgcgtcccaggtgctcgacctgctgtcccggccggtgtgccggcggcggttcgggttc
ggcgacgacgatctggcccggatgacccgctgggtcgccgaggccgggatccgctggggc
gtcgacgccggacaccgcgcgtcctacgcgatggagggtttcgagcacaacacctggcgt
gccggcctcgaccggctcctgctcggtgtcgcgatgagcgacgacgaccaccgccacgtc
gggcgcgggctgcccgtcgacgacatcgccagcggcgagatcgagctcgtcggccggctc
agcgaggccgtcgcccggctggccggctgcctcgacgcgctcggccgggccgaggcggcc
gacgcgtggttcgccgcgatcgccgacggcgtgcgcgacctgtgcgaggtcgacgccgac
gacgcctggcagctgccgcagttcgagcgcgagctcgcccgggcccgcgccagcgccgac
gagagcgaccccggcgtaccgctccggctggccgacgtccgcgcgctgctccaggcccgc
ctcgccggtcgccccacgcgcgccaacttccggaccgggatgctcaccgtcagcaccctc
gtcccgatgcgctcggtgccccaccgggtggtgtgcctggtcggtctcgacgacggcgtc
ttcccgcggaccagcggcgtcgacggcgacgacgtgctcgcccggcgtccgctcgtgggc
gagcgcgacctgcgcggcgaggaccgccagctcctgctcgacgccgtgctcgcggcgggg
gagcggctgatcatcacctacaccggcgctgccgagcacaccggccaggagcggccgccc
gccgtaccgctgggcgagctggtcgacgccctcgaccgcaccgcggccaccccggcccgt
ccggtcgtcgtcgtgcggcacccgctccaggccttcgacccgcgcaaccacaccgccggc
gccctggtcggtgccggggcgttcagcttcgaccgggcctcgctggccggggcgcgggcg
gcggtccgcgagcgcaccgcgccgccgccgttcctggccgacccgctgccgccggccccc
gcctcggccggggacgtgacgctcgccgacctggtcggcttcgtgcaccgcccggcccgg
accttcctgcgccggcgcctcgacgtggccacgccgttcgagcccgaccaggtcgccgac
gcgatcccggtcgcgctcaacgggctcgaggtctggcagatcggcgaccggctgctgcgc
gaggtcctcgccgccgacgacccggccgccaccgcgaccgccgtgatgaccgccgagcag
ctgcgcggctcgctgccgcccttcgacctcggccgggcggcgctgaccgacgtggtcaag
gagtgccaggagctgttcgcccgcagcgccgccctgcgcgccggcacgccccgcacggtc
gacgtcgacgtcgacctgggcggcggacgccggctcaccggcaccgtcccccgcgtccac
ggcaaccaggtcgtctcgctgtcctactcgcggctcaagcccaagcagcgcctggcctcc
tggctcgacgtgctggcgctgaccgccacccaccccgacgagaactggaccggccacgcc
gtcgcccgcgccaaggccggcccccagcgcgcgctcgtcggcccgctcgaccaccgggcg
accgagtggctccacgccctggtcgcgctctacgacgaggggctgacccggccgctgccg
atgcccctcgacaccgcctacgcctgggccgacgcccacgccaaggagctgcgcggcatg
gacgccgacccggtcgaggccgccgcccgcgcctgggtcaccgacccgttcaaccagtgg
gggatcaagggtgaggacgacgaccccgcccaccgccgcgtctacggccactccgcgccg
gtgaccgcgctcgtcgacgccgggctggcgtcgtacgcgtggacggtgtgggagccactg
ctcgccggcgccgagaaggtgggccacctgtga
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