Nocardioides sp. WV_118_6: ABFU82_23530
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Entry
ABFU82_23530 CDS
T10638
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_23530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocw02000
]
ABFU82_23530
Transporters [BR:
nocw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABFU82_23530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XBB67051
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All DBs
Position
4836881..4838536
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AA seq
551 aa
AA seq
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MPTSRRTELRPALALVAVLALGLTACSGTSSSEPDATFDTDTTTTPAASGPVDSFTWYGD
YRSPATLDPIKVADYPELTVIPNLCESLLDTGPGYEPKPGLASAWEQVDPRTVRFTLRDD
VTFSDGTPMTREDVLFSLRRNLDPALASSYSILYQGVAAIEPHGTDQVEVTFDEPNAVFL
KGMNTLGGAVISKKFAEAHPDDLGTPGTGVLCTGPYVLDSWDGVGPLTLKRSPEYWNDER
EPLAKQVRFEFPAEAKALANAIRTGAVDGGFNVPAEVIPSLRQTGTGELWLGAEGSTPQN
LDIIVSDLKKGPLADPAVRRALSGAVDRDALVRTAFAGAADPLYTVAGPGLWGYAKDRYR
AAYDEIERASKDASGGGREAVDEAGLSGEHLTLAYPGGIEMYRTTATVVQQAAKDLGLDM
KIVALPLAQYYSLFSDASVRADYDAFLTMNYTQVQEPAFMYGFIGNKDGSQNYGGYDNPE
VDRLLRAAFGEPDDDKRADLVIEAQAILAEELPWIPLVAPRAAVYLDEAITGVPLTFAYM
GTAWAASVGAP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgtcacgccgtaccgagctccgcccggccctggcactcgtcgccgtcctcgcc
ctcgggctcaccgcctgcagcggcaccagcagctctgagcccgacgccaccttcgacacc
gacacgaccaccacgcccgctgcgtcgggcccggtcgactccttcacctggtacggcgac
taccggagccccgccacgctcgacccgatcaaggtggccgactacccggagctcaccgtg
atccccaacctctgcgagagcctgctcgacaccggccccggctacgagccgaagccgggg
ctggcctcggcctgggagcaggtcgacccgcgcacggtccggttcacgctgcgcgatgac
gtgaccttctcggacgggacgccgatgacccgcgaggacgtcctgttcagcctccggcgc
aacctcgacccggcgctcgcgtcgtcctactcgatcctctaccagggtgtcgccgccatc
gagccgcacggcaccgatcaggtcgaggtgaccttcgacgagccgaacgccgtcttcctc
aagggcatgaacaccctcggcggcgcggtcatcagcaagaagttcgccgaggcccaccct
gacgacctgggcaccccggggacgggtgtgctctgcaccggcccctacgtgctggactcg
tgggacggcgtcggtccgctcaccctgaagcgcagccccgagtactggaacgacgagcgc
gagccgctcgcgaagcaggtgcgcttcgaattccccgccgaggccaaggccctggccaac
gcgatccgcaccggtgcggtcgacggcggcttcaacgtgcccgccgaggtgatcccgagc
ctgcgccagaccgggaccggtgagctgtggctcggtgccgagggcagcacgccccagaac
ctcgacatcatcgtcagcgacctgaagaaggggccgctggccgaccctgccgtacgccgc
gcgctgtccggcgccgtcgaccgcgatgcgctggtgcggaccgcgttcgcgggcgccgcg
gacccgctctacaccgtcgccggccccgggctctggggctacgcgaaggaccgctaccgc
gcggcgtacgacgagatcgagcgcgcgagcaaggacgcttccggcggcggccgcgaggcc
gtcgacgaggccgggctgagcggcgagcacctcaccctcgcctatcccggagggatcgag
atgtaccggacgaccgcgacggtcgtgcagcaggccgccaaggacctcggcctggacatg
aagatcgtcgcgctgcccctggcccagtactactcgctcttctccgacgcgtcggtgcgc
gccgactacgacgccttcctgacgatgaactacacgcaggtgcaggagccggcgttcatg
tacggcttcatcggcaacaaggacggcagccagaactacggcggctacgacaaccccgag
gtggaccggctgctgcgcgccgccttcggcgagccggacgacgacaagcgggccgacctg
gtcatcgaggcgcaggcgatcctggccgaggagctgccctggatcccgctggtggcgccc
cgcgccgcggtctacctcgacgaggccatcaccggcgtcccgctgaccttcgcctacatg
ggcaccgcctgggccgcctcggtgggcgcaccgtga
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