Nocardioides sp. WV_118_6: ABFU82_23560
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Entry
ABFU82_23560 CDS
T10638
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00061
Fatty acid biosynthesis
nocw00071
Fatty acid degradation
nocw01100
Metabolic pathways
nocw01212
Fatty acid metabolism
nocw02024
Quorum sensing
nocw04146
Peroxisome
Module
nocw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABFU82_23560
00071 Fatty acid degradation
ABFU82_23560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABFU82_23560
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_23560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nocw01004
]
ABFU82_23560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nocw04147
]
ABFU82_23560
Enzymes [BR:
nocw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABFU82_23560
Lipid biosynthesis proteins [BR:
nocw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABFU82_23560
Exosome [BR:
nocw04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABFU82_23560
Exosomal proteins of breast cancer cells
ABFU82_23560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XBB67057
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All DBs
Position
4843331..4844878
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AA seq
515 aa
AA seq
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MSAAPPLLPGDLLVTAARTRPTAVALVDGERSLTYADLAERSGRVAGWFQAHGVRRGDRV
TIHAPNSAAWVEAYHGALRSGAVVNPVNALLTTSELAYVLDDCGARILCTTAAMLAALDR
AVLSRLDAVVVLDGLPPGDRADGVEVVALEDVVAAGRTPSPVELRPEDPAVIGYTSGTTG
HPKGAVQSQRAVLLNWQLSAQAHAKTSADVVVTALPAPHVYGSVVLNGTLGAGGTVVLMS
RFDARGALRLVAEHRATVFEGVPAMYAMMLAEPALDPADLASLTRCTVGGQTMAVSTMTA
WETASGAPLIELWGMTELSGLGTTHPVGTERVPGSIGRPLPGMEARVADLEHPEEDAGLD
QPGELWMRGPLVMTEYFGRPEDTAEALAGGWLRTGDLVRRDAQGNLWVVDRCRDLILSGG
YNIYPAEIERVLSGHPAVALVAVGPVPDEVKGEAARAYVVLREGHQVTGDELVACARAEL
AAYKVPRSVVFVPALPQTSSGKIMRRALRELPVAD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcaccgcccctgctccccggcgacctgctcgtcacggccgcacggacccgt
cccacggcggtggcgctcgtcgacggggagcggtcgctcacctatgccgacctggccgag
cgttcgggccgggtggccggctggttccaggcgcacggcgtacgccgcggcgaccgggtg
accatccacgcgcccaacagcgccgcatgggtggaggcctaccacggcgccctgcgcagc
ggcgccgtcgtcaacccggtcaacgccctgctcaccaccagcgagctggcctacgtgctg
gacgactgcggtgcccggatcctgtgcaccacggccgcgatgctcgccgccctcgaccgt
gcggtgctgagccggctcgacgccgtcgtcgtcctggacgggctcccgccgggcgatcgc
gccgacggggtcgaggtcgtcgcgctcgaggacgtggtcgccgccggccgtacgccgtcc
ccggtcgagctccggcccgaggaccccgccgtgatcggctacacctccggcaccaccggg
caccccaagggcgccgtgcagtcccagcgcgcggtcctgctcaactggcagctgagcgcc
caggcgcatgccaagaccagcgcggacgtcgtggtcacggcgctgccggccccgcacgtc
tacggcagcgtggtcctcaacggcacgctgggcgccggcgggaccgtcgtgctgatgagc
cggttcgacgcccgcggcgccctgcgcctcgtggccgagcaccgcgcgacggtgttcgag
ggcgtcccggcgatgtacgcgatgatgctggccgagcccgccctggacccggccgacctc
gccagcctcacccgctgcacggtcggcggtcagacgatggccgtgtccacgatgaccgcc
tgggagacggccagcggcgcaccgctcatcgagctgtgggggatgacggagctctccggg
ctcggcaccacgcacccggtcggcaccgagcgcgtccccggctccatcggccgcccgctg
ccggggatggaggcgcgggtcgccgacctggagcatccggaggaggacgccggtctcgac
cagcccggcgagctctggatgcgcggtccgctggtgatgaccgagtacttcggccggccc
gaggacaccgccgaggcgctcgccggcggctggctgcgcaccggggacctggtccgccgc
gacgcgcagggcaacctgtgggtggtggaccgctgtcgcgacctgatcctgtccggcggc
tacaacatctacccggccgagatcgagcgggtgctgtccgggcacccggcggtcgcgctg
gtcgccgtgggtccggtgccggacgaggtcaagggcgaggccgcccgggcctatgtcgtc
ctccgcgagggacaccaggtcaccggcgacgagctggtcgcgtgcgcccgggccgagctg
gcggcgtacaaggtgccgcggtcggtggtcttcgtcccggccctgccgcagacgtcgagc
gggaagatcatgaggcgcgcgctccgggagctgccggtcgccgactga
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