Nocardioides sp. WV_118_6: ABFU82_23835
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Entry
ABFU82_23835 CDS
T10638
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nocw Nocardioides sp. WV_118_6
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nocw03110
]
ABFU82_23835
Chaperones and folding catalysts [BR:
nocw03110
]
Heat shock proteins
HSP100
ABFU82_23835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
TniB
Sigma54_activat
AAA_14
nSTAND3
RsgA_GTPase
IstB_IS21
VapE-like_dom
UVR
RNA_helicase
AAA_24
bpMoxR
AAA_3
NACHT
Roc
AAA_19
DUF815
DNA_pol3_delta2
DUF99
Torsin
TetR_C_32
NBD_SMAX1
TYW2_N
Motif
Other DBs
NCBI-ProteinID:
XBB67107
LinkDB
All DBs
Position
4909064..4911646
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AA seq
860 aa
AA seq
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MFERFTDRARRVVVLAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVR
AQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHSYIGTEHILLGLIREGEGVA
AQVLQKLGADLNRVRQQVIQLLSGFQGKESSSTASAAGATSGGDAPSSSLVLDQFGRNLT
QDAREGKLDPIIGRAAQIERVMQVLSRRTKNNPVLIGEPGVGKTSIVEGLAQDIVKGNVP
ETLKDKQIYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAE
GAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVPEPSIADTIEML
KGIRDRYEAHHRVTITDEALVSAATLADRYISDRFLPDKAIDLIDEAGSRLRIRRMTAPA
DLREYDDKIADVRQRKEAAIDGQDFEAAARLRDEEKQLILAKSEREKQWRAGDMDEVAEV
DEELIAEVLAVATGIPIVKLSEEESTRLLKMEDELHKRVIGQEEAVKALSRAIRRTRAGL
KDPKRPGGSFIFAGPSGVGKTWLSKTLAEFLFGDEDALIQLDMSEFGEKHTVSRLFGSPP
GYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVVDFKN
TVIIMTTNLGSRDIGKSVGLGFSSGDAAGSYDRMKAKVSDELKQHFRPEFLNRVDEIIVF
PPLSSEQIVAMVDNMIAAVEVRMKDRDMRLELTQAAKNLLAERGFDPVLGARPLRRTIQR
EIEDVLAEKMLYGEVGPGQIVLVDVDGEGPTATFTFEGQKVGELPDMPPLETVADSAAGA
GAGDLPEDPGSAASASSESA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagcggttcactgaccgagcccgccgggtggtcgtgctggcccaggaggaggcc
cgcatgctctcccacaactacatcgggaccgagcacatcctgctcgggctcatccacgag
ggagagggcgtcgccgccaaggcgctggagtcgctcgacatctccctcgaggcggtccgg
gcccaggtcgaggagatcatcggccaggggcagcaggctccgtccggccacatccccttc
acgccgcgtgccaagaaggtcctcgagctgtccctgcgcgaggcgctgcagctcggtcac
tcctacatcggcaccgagcacatcctgctcgggctgatccgtgagggtgagggcgtggcc
gcccaggtcctgcagaagctcggcgccgacctcaaccgggtccgccagcaggtcatccag
ctgctgtccggcttccagggcaaggagagcagctcgaccgcgtcggcggccggtgccacg
agcggtggcgacgcgccgtcgtcctcgctggtgctcgaccagttcggtcgcaacctgacc
caggacgcccgcgagggcaagctcgacccgatcatcggtcgcgccgcgcagatcgagcgc
gtgatgcaggtgctctcgcggcgtaccaagaacaacccggtgctcatcggtgagcccggc
gtcggcaagacctcgatcgtcgagggtctggcccaggacatcgtcaagggcaacgttccc
gagacgctcaaggacaagcagatctacacgctcgacctgggtgccctggtcgccggctcg
cgctaccgcggtgacttcgaggagcgcctcaagaaggtgctcaaggagatccgcacgcgc
ggcgacatcgtgctgttcatcgacgagatccacaccctcgtcggtgccggtgcggccgag
ggcgcgatcgacgccgcgtcgatcctcaagccgatgctggcccgcggtgagctccagacc
atcggtgccaccacgcttgacgagtaccgcaagtacctcgagaaggacgccgccctcgag
cgccgcttccagccgatccaggtgcccgagccgtcgatcgccgacacgatcgagatgctc
aagggcatccgtgaccgctacgaggcgcaccaccgggtgaccatcaccgacgaggcgctg
gtctccgcggccaccctcgccgaccgctacatctccgaccggttcctgccggacaaggcg
atcgacctcatcgacgaggccggctcgcggctgcgcatccgccggatgacggctcccgcc
gacctgcgcgagtacgacgacaagatcgccgacgtccgccagcgcaaggaggcggccatc
gacggtcaggacttcgaggcggccgcgcgtctgcgcgacgaggagaagcagctgatcctg
gccaagtccgagcgcgagaagcagtggcgtgccggtgacatggacgaggtcgccgaggtc
gacgaggagctcatcgccgaggtcctcgccgtcgcgaccggcatcccgatcgtcaagctc
tccgaggaggagtccacgcggctgctcaagatggaggacgagctgcacaagcgggtcatc
ggccaggaggaggccgtcaaggcgctcagccgggcgatccgtcgtacgcgtgcgggtctg
aaggaccccaagcgtcccggtggctcgttcatcttcgccggcccctccggtgtcggaaag
acgtggctgtccaagacgctcgccgagttcctgttcggtgacgaggacgcgctgatccag
ctcgacatgtccgagttcggcgagaagcacaccgtctcgcggctcttcggttcgccgccg
ggatatgtcggttacgaggagggtggtcagctcaccgagaaggtgcgccgcaagccgttc
tccgtcgttctcttcgacgaggtcgagaaggcccaccccgacatcttcaacagcctgctg
cagattctcgaggaaggtcgcctgaccgactcgcagggtcgggtcgtggacttcaagaac
accgtgatcatcatgaccacgaacctcggctcgcgcgacatcggcaagtcggtcggcctg
ggcttcagctcgggcgacgccgccggctcctacgaccggatgaaggcgaaggtctccgac
gagctcaagcagcacttccgcccggagttcctcaaccgggtcgacgagatcatcgtcttc
ccgccgctgagctccgagcagatcgtcgcgatggtggacaacatgatcgccgccgtcgag
gtccggatgaaggaccgcgacatgcgcctcgagctcacccaggccgccaagaacctgctc
gccgagcggggcttcgacccggtcctgggcgcccggccgctgcgtcgcacgatccagcgc
gagatcgaggacgtgctcgccgagaagatgctctacggcgaggtcggccccggccagatc
gtgctcgtggacgtcgacggcgagggccccacggcgaccttcaccttcgaggggcagaag
gtcggggagctccccgacatgccgccgctcgagacggtcgccgacagcgccgcgggtgcg
ggtgccggcgacctgccggaggaccccggttccgccgcctccgcctcgtccgagtcggcc
tga
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