Nocardioides sp. WV_118_6: ABFU82_24610
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Entry
ABFU82_24610 CDS
T10638
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03020
RNA polymerase
Brite
Enzymes [BR:
nocw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABFU82_24610
Transcription machinery [BR:
nocw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABFU82_24610
DNA repair and recombination proteins [BR:
nocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABFU82_24610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBB67253
LinkDB
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Position
5062156..5066034
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDVNFFDQLQIGLATADDIRTWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDARHRDLSSLEGKVQLQRESIEKRRDAGLEDRTKKLEDD
LATLEAEGAKADQRRKVRDGAERELKQLRDRAQRELDRLDEVWDTFKSLKVQDLMGDEIL
YREMKNWFGKYFEGHMGATAIQKRLQSFDLDAEVENLRETIATGKGQRKVRALKRLKVVE
AFRKTGNKPEGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVSGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPTQDMIIGLFFLTTERGEATVEAG
GETRLRTFSSPAEAIMAYDRGEITLQNKVQIRLEDYFFEGVEEGVASLVETTLGRTIFND
ALPADYPYVNEEVGKKRLGAIVNDLAERYPKVVVAASLDALKDNGFHWATRSGVTVSIDD
VITPPNKSEILAKHEADAAKIQKQYERGLVTDDERRQELIEIWTKASQEVGKALRATFEA
NPTNPIYVQVHSGASGNFNQINQVGAMRGLVANPKGEIIPRPIKANFREGLSVLEYFIST
HGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTERGLPKVIGVKDENGVVVKD
ENAETAAYARSAAKEITHPTTGEVLATAGEDLGDVKIAELIEAGIETVTVRSVLTCDART
GTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPR
VVELFEARTPKGHAQISEAAGRISIEETDKARIVIVTPDDGSEVKEYPVSRRSRLLVEDG
GRVEVGDKFTAGTEDPKEVLRILGVRKTQQHLVDQVQEVYRSQGVSIHDKHIEIIVRQML
RRITVLESGETNLLPSDLVDRVRFEEENRRVVSEGGKPASGRPELMGITKASLATESWLS
AASFQETTRVLTDAAINGRSDSLRGLKENVIIGKLIPAGTGLERYRNIRVEPTEEARAAA
YAVTGYESYDYEFGNQGQAVALDDFDFGSYQN
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtgaacttcttcgaccagcttcagatcggcctggccaccgcggacgacatc
cgcacgtggagccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctccaaggtccgccgtgagcggatgggccacatcgagctcgccgccccg
gtcacccacatctggtacttcaagggtgtgccgagccgcctgggctacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacctcggtcgac
gaggacgcccggcaccgcgacctgtcctcgctcgagggcaaggtgcagctccagcgcgag
tccatcgagaagcgtcgcgacgccggcctcgaggaccgcaccaagaagctcgaggacgac
ctcgccacgctcgaggccgagggtgccaaggccgaccagcgccgcaaggtgcgcgacggc
gccgagcgcgagctcaagcagctgcgcgaccgcgcccagcgcgagctggaccgcctcgac
gaggtctgggacacgttcaagagcctcaaggtccaggacctcatgggcgacgagatcctc
taccgcgagatgaagaactggttcggcaagtacttcgagggccacatgggcgccacggcg
atccagaagcgcctgcagagcttcgacctcgacgccgaggtcgagaacctgcgcgagacc
atcgccaccggcaagggtcagcgcaaggtccgcgcgctcaagcggctcaaggtcgtcgag
gccttccgcaagaccggcaacaagcccgagggcatggtcctcgacgccgttccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctgctcgacctc
ggtgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcg
ctgttcgacaacggccgtcgtggtcgccccgtcaccggcccgggcaaccggccgctgaag
tcgctctccgacatgctcaagggcaagcagggtcgcttccgccagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcgtgtcgggtccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctc
gtcgacctgtcgcacgcgcagaacatcaagtccgccaagcggatggtcgagcgcgcccgc
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgt
gcgcccacgctgcaccgtctcggcatccaggccttcgagccccagctgatcgagggcaag
gccatccagctgcacccgctggtctgcaccgcgttcaacgccgacttcgacggtgaccag
atggcggtccacctgccgctgtccgccgaggcgcaggccgaggcccggatcctgatgctg
tcgaccaacaacatcctcaagccgtcggacggccgtccggtgaccatgcccacccaggac
atgatcatcggcctgttcttcctcaccaccgagcgtggcgaggcgacggtcgaggccggc
ggcgagacccgcctgcggaccttctcgtccccggccgaggcgatcatggcctacgaccgc
ggcgagatcacgctgcagaacaaggtccagatccgtctcgaggactacttcttcgagggt
gtcgaggagggcgtggcctcgctggtcgagaccacgctgggccgcacgatcttcaacgac
gcgctgccggccgactacccgtacgtcaacgaggaggtcggcaagaagcgcctcggcgcg
atcgtcaacgacctcgccgagcgctaccccaaggtcgtcgtcgcggcgtccctggacgcg
ctcaaggacaacggcttccactgggccacccgctcgggtgtcacggtctcgatcgacgac
gtcatcacgccgccgaacaagtccgagatcctcgccaagcacgaggccgacgcggccaag
atccagaagcagtacgagcgcggtctggtcaccgacgacgagcgtcgccaggagctcatc
gagatctggaccaaggcgagccaggaggtcggcaaggcgctgcgggccaccttcgaggcg
aacccgaccaacccgatctacgtccaggtccactcgggcgcctcgggtaacttcaaccag
atcaaccaggtcggcgccatgcgtggtctggtggccaaccccaagggcgagatcatcccg
cggccgatcaaggccaacttccgcgagggtctgtccgtgctggagtacttcatctccacc
cacggtgcccgcaagggtctggcggacaccgcgctgcggaccgccgactcgggctacctg
acccgtcgtctggtcgacgtgtcgcaggacgtcatcatccgtgaggacgactgcggcacc
gagcgcggcctgcccaaggtcatcggcgtcaaggacgagaacggcgtggtcgtcaaggac
gagaacgccgagaccgccgcgtacgcccgctcggccgccaaggagatcacccacccgacc
acgggtgaggtgctcgccaccgcgggcgaggacctcggtgacgtcaagatcgccgagctc
atcgaggccggcatcgagacggtcacggtccgctcggtcctgacctgcgacgcccgtacc
ggtacctgcgcgaagtgctacggccgctcgctggcgaccggcaagctcgtcgacatcggc
gaggccgtcggcatcatcgcggcccagtcgatcggtgagcccggcacgcagctgaccatg
cgtaccttccacaccggtggtgtggcctcggccgacgacatcacgcagggtctgccccgc
gtcgtggagctcttcgaggcgcggacccccaagggtcacgcccagatctccgaggccgcc
ggtcgcatctccatcgaggagaccgacaaggcccgcatcgtcatcgtcacccccgacgac
ggcagcgaggtcaaggagtaccccgtgtcccgccgctcgcgcctcctcgtcgaggacggc
ggccgggtcgaggtgggcgacaagttcaccgccggtaccgaggacccgaaggaggtgctg
cgcatccttggtgtccgcaagacccagcagcacctcgtcgaccaggtccaggaggtctac
cggtcgcagggtgtgtcgatccacgacaagcacatcgagatcatcgtgcggcagatgctg
cgccggatcacggtgctcgagtcgggcgagaccaacctgctgccgtccgacctcgtcgac
cgggtccgcttcgaggaggagaaccggcgcgtggtctccgagggcggcaagccggcctcg
ggtcgtccggagctcatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctctcg
gcggcctccttccaggagaccacccgggtgctcaccgacgccgcgatcaacggccgctcc
gacagcctgcgcggcctgaaggagaacgtgatcatcggcaagctgatcccggccggtacc
ggcctggagcgctaccggaacatccgggtcgagcccaccgaggaggcgcgcgccgcggcg
tacgccgtcaccggctacgagtcctacgactacgagttcggcaaccagggccaggccgtg
gcgctggacgacttcgacttcggttcctaccagaactga
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