Nocardioides sp. WV_118_6: ABFU82_26470
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Entry
ABFU82_26470 CDS
T10638
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFU82_26470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocw02000
]
ABFU82_26470
Transporters [BR:
nocw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABFU82_26470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
nSTAND1
AAA_29
AAA_30
SbcC_Walker_B
AAA_23
AAA_27
AAA_16
ORF_2_N
Dynamin_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
XBB67611
LinkDB
All DBs
Position
complement(5423192..5424148)
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AA seq
318 aa
AA seq
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MNGAGDVSGERLLTLDALQVRRGRASVVHGVDLTLDRGEVVAVLGPNGAGKSSLLEAVGG
VVRAHGGRVERTGRVASVLQAPGLASRSVRANVELALAWWGVPRSQRRARAMEALEQMRA
AHLARRHATTLSGGERRRVHVARGIALRPDLLLLDEPFAGLDAETRAALCEDTGSALRTA
AGGVLVVVHDRAEAWALATRLVVMVEGRIVAAGGPDALLAAPPSAEVARFLGYDGELVLG
DELVLTRPPHVVLDAAGELTGTVTRLVPQQDGVRIEVTGAHGAVRTVRPTGSVGLGDPVR
FRLDGAVRFPAPAATGAP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgcgggcgacgtgagcggcgagcggctcctcaccctcgacgccctgcaggta
cgccgcggccgggcgagcgtcgtccacggcgtcgacctgaccctggaccgcggcgaggtc
gtggcggtgctcggcccgaacggcgcgggcaagagcagcctgctcgaagcggtcggcggc
gtggtccgcgcccacggcggccgggtcgagcggaccggacgcgtcgcctccgtgctgcag
gccccgggtctggcgagccggtcggtgcgcgcgaacgtcgagctcgcgctcgcctggtgg
ggcgtcccgcggtcgcagcggcgggcgcgggcgatggaggcgctggagcagatgcgggcc
gcgcacctcgcccggcgccacgcgacgaccctgtcgggcggggagcggcgccgggtccac
gtcgcccgcgggatcgcgctccggcccgacctgctgctcctcgacgagccgttcgccggc
ctcgacgccgagacccgcgccgcgctgtgcgaggacacggggtcggcgctgcgcaccgcg
gcgggcggcgtcctcgtcgtcgtccacgaccgcgcggaggcctgggcgctggcgacccgg
ctggtcgtcatggtcgagggccggatcgtcgccgcgggcggtccggacgcgctcctcgcc
gccccgccgagcgccgaggtcgcccgcttcctcgggtacgacggcgagctggtcctcggc
gacgagctggtcctgacccgtcccccgcacgtcgtcctcgacgccgccggcgagctcacc
ggcaccgtcacccggctggtcccccagcaggacggcgtccggatcgaggtcaccggagcg
cacggcgccgtgcggaccgtccggccgaccgggagcgtcggtctcggcgaccccgtccgg
ttccggctcgacggcgcggtccggttccccgccccggcggcgacgggagcgccctag
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