Nocardia otitidiscaviarum: FOH10_01105
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Entry
FOH10_01105 CDS
T06114
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod03420
Nucleotide excision repair
nod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOH10_01105 (pcrA)
03430 Mismatch repair
FOH10_01105 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_01105 (pcrA)
Enzymes [BR:
nod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOH10_01105 (pcrA)
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOH10_01105 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FOH10_01105 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDP77550
UniProt:
A0A516NF63
LinkDB
All DBs
Position
311944..314367
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AA seq
807 aa
AA seq
DB search
MNATVAEDEQKTERLLEGLNPQQRAAVMHTGSPLLIVAGAGSGKTAVLTRRIAYLLAARD
VHPGQILAITFTNKAAAEMRERVAGLVGPRAASMWVSTFHSSCVRILRTQAGLVPGLNSN
FSIYDADDSRRLLAMIGRDLDIDAKKYTPRLLATAISNLKNELIDPDQAAADAETDDTEF
PRVVARVYDEYQRRLRAANALDFDDLIGETVALLQRHPNVAEYYRRRFRHVLVDEYQDTN
HAQYILVRELVGHHLAADSEVPPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAETI
LLEQNYRSTQHILAAANAVIARNENRREKKLWTDRGDGDLIVGYVADNEHDEASFVAREI
DRLVDQGDANYADVAVFYRTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDIVAYLR
VLENPNDAVSLRRILNTPRRGIGDRAEACVAVHAEQRGIGFAQALRDAADGKVALLNTRS
QRAIAGFLDLLEQIRAAGAQEDLDFPDVGSVVEAVLDRTGYRAELEASDDPQDGARLDNL
NELVSVAREFSSEARNNVEAARAEGILPEAAEGEPEPGSLAAFLERVSLVADTDQIPDEG
TGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPTELAEERRLAYVGITRARKRL
YLTRAVVRSGWGQPVSNPESRFLQEIPQHLLDWRRLEPAPKQSSGFRRRRDDEGFERDWT
RGDGWSEPRPGVRDRGGERRPAPASAGKRNNTGLVLAVGDRVSDDKYGLGRVVAAEGFGA
LATVTIDFGTAGKIRLIPQYSRTLVKL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacggtggctgaggacgaacagaagaccgagcggttgctcgaggggttgaac
ccgcaacagcgcgccgcggtgatgcacaccgggtcgcccctgctgatcgtggcgggtgcg
ggctcgggcaaaaccgcggtgctcacccggcgtatcgcctacctgctcgccgcgcgggac
gtgcatcccgggcagatcctcgccatcaccttcaccaacaaggccgccgccgagatgcgg
gaacgggtggccggtctggtcgggccgcgcgcggccagcatgtgggtgtcgaccttccac
tccagctgtgtgcgcatcctgcgcacccaggccggactggtgccggggctcaactccaac
ttctccatctacgacgccgacgactcgcgccgcctgctcgccatgatcgggcgtgatctc
gacatcgacgccaagaagtacaccccgcgcctgctcgccaccgccatctccaacctcaag
aacgagctcatcgacccggatcaggccgccgccgacgccgagaccgacgacaccgagttc
ccgcgcgtggtcgcccgcgtctacgacgagtaccagcggcggctgcgcgcggccaacgcc
ctcgacttcgacgacctcatcggcgagaccgtggcgctgctgcagcggcacccgaatgtg
gccgagtactaccggcggcggttccggcacgtgctcgtcgacgaataccaggacaccaac
cacgcgcagtacatcctggtgcgcgagctggtgggccatcatctcgccgccgactccgag
gtgccgcccagcgaactgtgcgtggtgggtgacgccgatcagtccatctacgccttccgc
ggtgccaccattcgcaatatcgaggagttcgagcgcgacttcccggacgcggaaaccatt
ctgctggaacagaattaccgttccacccagcatattctggccgccgccaacgcggtcatc
gcccgcaacgagaaccggcgcgagaagaagctgtggaccgatcggggcgacggcgacctg
atcgtcggatacgtcgccgacaacgagcacgacgaggcgtccttcgtggcccgcgagatc
gaccggctggtggatcagggcgatgccaactacgccgatgtggcggtgttctaccgcacc
aacaacaactcccgggcgctggaagagatcttcatccgcatgggactgccctacaaggtg
gtcggcggcgtccggttctacgagcgcaaggaggtgcgcgacatcgtcgcgtacctgcgg
gtgctggagaatccgaacgacgcggtgagcctgcggcgcattctcaacaccccgcgccgc
ggcatcggcgaccgggccgaagcctgcgtggccgtccacgccgaacagcgcggcatcggt
ttcgcccaggcgctgcgcgatgcggccgacggcaaggtggcgctgctcaacacccgctcg
cagcgggccatcgcgggtttcctggacctgctcgagcagatccgggcggcgggcgcgcag
gaggatctggacttcccggatgtgggcagtgtggtggaggcggtgctcgaccgcaccggc
taccgcgccgaactggaggcgtccgacgatccgcaggacggggcgcggctcgacaacctc
aacgagttggtcagcgtggcacgggaattcagttccgaggcgcgcaacaacgtggaggcc
gcgcgggccgagggcatcctgcccgaggccgccgagggcgaacccgaacccgggtcgctg
gcggccttcctggagcgggtgtcgctggtggccgataccgaccagattcccgacgagggc
accggggtggtcaccctcatgaccctgcacaccgccaaggggctggaattcccggtggtc
ttcgtgaccggctgggaggacgggcagttcccgcatatgcgcgcgctcggcgatcccacc
gaactggccgaggaacgccgcctcgcctacgtgggcatcacccgcgcccgcaaacggctg
tacctgacccgcgcggtggtgcgctccggctggggccagcccgtctcgaatcccgaatcc
cgcttcctccaggagattccgcagcacctactggactggcgtcgcctggaacccgcgccg
aaacagtccagcggattccggcggcgacgcgacgacgaaggcttcgaacgggattggaca
cggggcgacggctggagcgaaccccggcccggcgtgcgggatcgcgggggcgagcgccgt
ccggctcccgcctccgccggaaaacgcaacaacaccggtctggtgctggcggtgggggac
cgggtcagcgacgacaagtacggcctggggcgggtggtcgccgccgaggggttcggcgca
ttggccacggtgacaatcgatttcggcaccgcgggcaagatcagactgattccgcagtac
agccgcaccctcgtcaagctctga
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