Nocardia otitidiscaviarum: FOH10_01560
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Entry
FOH10_01560 CDS
T06114
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOH10_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_01560
Enzymes [BR:
nod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FOH10_01560
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOH10_01560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDP77627
UniProt:
A0A516NFH2
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All DBs
Position
complement(395687..396463)
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AA seq
258 aa
AA seq
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MPGCPISACHGTALRAAWLAGTVFRTISDMEDDLVECRACPRLVAWRERVADEKRAAFRE
EAYWGRPVPGYGPDDAKLLVVGLAPAAHGGNRTGRMFTGDRSGDVLYAAMHAVGLANQPT
AAHRGDGLRLLGARVTAPVHCAPPDNKPTTTERDTCRRWLIAELDLLAPTLRSIVVLGGW
GWQALLPTLAQSGWALSKPRPKFGHGVHTTITPTHPDRTPLHLFGCYHVSQQNTFTGRLT
PAMLEAVLAEAKGAADIR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctgtccgatttcggcctgtcatgggacggcgttgcgggcggcatggttggct
ggaaccgtgttccgcacgatctccgatatggaggacgaccttgtcgagtgccgagcctgc
ccgcgtctggtggcgtggcgggagcgggtcgccgacgagaagcgcgcggccttccgcgag
gaggcgtactggggtcgaccggtgcccggatacggcccggacgatgcgaaactgctggtg
gtcggcctggctccggccgcgcacggcggcaatcgcaccggacggatgttcaccggggac
cgcagcggcgatgtcctctacgccgccatgcacgccgtcggcctcgccaatcaaccgacc
gccgcacatcgcggcgacggcctgcgcctgctcggcgcccgcgtcaccgcccccgtccac
tgcgccccgcccgacaacaaaccgaccaccaccgaacgcgacacctgccgccgctggctg
atagccgaactcgacctcctcgcccccacgctgcgttcgatcgtggtcctgggcggctgg
ggctggcaggccctgcttcccaccctcgcccaatccggctgggcactatcgaaacccaga
cccaagttcggccacggcgtccacaccaccatcacccccactcaccccgaccgcacaccc
ctgcacctgttcggctgctaccacgtcagccagcagaacaccttcacgggccgcctgact
ccggccatgctggaagccgtgctggccgaggcgaagggcgctgctgatatccggtga
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