Nocardia otitidiscaviarum: FOH10_02050 Help Entry FOH10_02050       CDS       T06114                                  Name (GenBank) TIR domain-containing protein Organism nod  Nocardia otitidiscaviarum SSDB OrthologParalogGene clusterGFIT Motif Pfam:  nSTAND1 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Ge1_WD40 PD40 Beta-prop_IFT140_1st NBCH_WD40 TIR_2 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SCAP AAA_16 DUF7165 Beta-prop_IP5PC_F AAA_22 RAB3GAP2_N Motif Other DBs NCBI-ProteinID:  QDP77704 UniProt:  A0A516NFM2 LinkDB All DBs Position complement(497403..501647) Genome browser AA seq 1414 aa AA seqDB search MTRIFLSHSSKDNAEAIALRQWLIEQDPSLAEDIFLDLTRETGIPAGVRWKDALVRANER CEAVICLLSADWLASRECAVEYRTAENLGKRIFSARLEPLTDTDITREWQRCDLFGDGPR TEIAVAGHSPVTFRTEGLHRLLDGLRTAGLGAQHFPWPPSNDPQRSPYRGWQPFEAVDAA VYFGRDVQIVRAMDMLRGMRAGARPSVFAILGPSGTGKSSFLRAGLLPRLARDDRRFAVL DIVRPERAALTGARGLAAAIHGTRTRLGLSGPSLGDIKSALPHRVDLVRQWLREITRAAH DRLIDPAAAQPTPVLPIDQAEELFGADAGVEGGQLLDILARVLTDSDPAPLLVALTVRTD RYELFQTAPQFADIDTLVFDHLKPLPRTRFREVITGPAARATAAGHRLEIEPALLDQLLV DCTDGADTLPLLALTLSRLYQDYGDDGMLTLDEYVAMGAMNRVVRTEIDNQLSGDPTERR TQLKLLRSAFIPWLATINPENDQPLRRIARWSDLPADSRPLVDLLVEARLLVKDHRNGET VVEVATESLLRQWDELAGWLRHRAEELKDADALEQSARSWERNEHDEAWLLEGTRLVEAE SLVTEPGFRERLEPVRAYITASRARENERAEAEKRRQHKELHVAKERQQAAEALAAAAAR AELKAQEHAAAIRTQSRGLLVLAAVSLVITLVAVVGFVQAREARNDVRERAREGLALQLI AESKAMASGLQGGGSVLAMQLTLAALELSENERVRTAAVDLLYANPDLRWVNELEPIHTV GFSPDGTRVRAGTTGGAVHSFDARTGRDAGAPTVDAQLLTRALSPDGSRVAVWDNGFRVL DIRTGQTLYRAPDGEGWVPAATFSPDGRRIAYADQNRTIQVVDIETGVVVAEPPTDSHPA LSALAFSPDGRLLAVVGGTAYVWEIDSGEVITGALVEDFTAVAFAPDGRRIATGDQDGSV RVWDITEDELTGTGIHGHTGRVDALAFGPDGTMLASGDEDGTVRAWQIVPSDDGRSSVIY KAAGPLTGHVGPVQAVGFSPDGRGIVSGGSDGTVRVWEPPLGRFRIDDPGFLERYIQAVA FSPDGSRMTAAYASGAVRVWDVRNGHAASTPLDTRVDVPDELQGSITVTLDADGSRMAMV PEDGAVYIWNVDTGTLIAGPVRVPGDRLRAVAFDSADRLVATVETGNAVQVVAVESGQVI GDPMTERARDFTTTYLSPGGSWLATADSDGRVRIWDVESGRSRGRPITPEPRLGTLAVSA DGERVATGGSDGRVWIWQVETGETIAGPMSGHLGTVVNAAFSPDGKWLVTVGQDGTTRLW DAATGSARGSSRGISQFGLDSLSSVLTFHPEGKTFVTSDIEGVVREWPIFESVTTELCGR LTANMSRKTWREWVSADIEYRRLCPALPIAPDGP NT seq 4245 nt NT seq  +upstreamnt  +downstreamnt gtgacgcgaatattcctcagtcattcgagcaaggacaatgccgaggcgatcgccctgcgg cagtggctgatcgaacaggatccgagcctggccgaggacatcttcctcgatctgactcga gagaccggtatcccggcgggggttcgctggaaggacgccctggtccgcgccaatgaacgc tgtgaagccgtcatctgcctactgtcggccgactggctggcctcgcgggaatgcgcggtg gagtatcgcaccgccgagaatctcggtaagcgcatattcagcgcccggctggagccgctg accgacaccgacatcacccgtgaatggcagcggtgcgacctcttcggtgacggcccgcgg accgagatcgcggtggccggccactcccccgtcaccttccgcaccgagggcctgcaccgc ctgctggacggcttgcgcacggcggggctgggcgcacaacactttccgtggccgccgtcg aacgacccccaacgctcgccctaccgtggctggcagcccttcgaagcggtcgacgccgcg gtgtacttcggtcgtgacgttcagatcgtgcgcgcgatggacatgctgcgcggcatgcgc gccggtgcgcgaccttcggtgttcgcgatcctgggtccttcgggcacggggaagtcctcg tttctgcgcgcgggcctgctcccgcgactggcccgcgacgaccgccggttcgcagtgctc gatatcgtccgtccggagcgggccgcgctcaccggcgctcggggtctggcggccgcgatc catggcacgcgcactcggctcgggctgtccggcccgtcgctcggcgacatcaaatccgca ctgccgcaccgcgtcgacctggtccggcagtggctgcgggagatcacgcgcgccgctcac gaccgattgatcgaccccgccgcggcccaacccaccccggtgctgcccatcgaccaagcc gaggaactgttcggtgccgacgccggggtcgaaggcggacagctcctggacatactcgcc cgtgttctcaccgactccgaccccgcacccctgctggtcgcgctgaccgtccgcaccgat cgctacgagttgttccaaacggcaccgcaattcgccgatatcgacacgctcgtcttcgat catctgaaaccgctgcctcgcacccgctttcgcgaggtgatcacgggccccgcggcccgc gccaccgctgccggccaccgtctcgagatcgagcccgctctgctcgaccaactcctcgtc gactgcaccgacggcgccgacacgttgccgctgctagcgctcaccctgtcccggctgtac caggactacggcgacgacggcatgctgaccctggacgagtacgtcgcgatgggcgcgatg aatcgtgtggtgcgcacggagatcgacaatcaactgtccggcgaccccaccgaacgccgc acgcaactgaagctgctgcgcagcgcgttcattccatggctcgcgaccatcaaccccgag aacgaccagccgctgcgccgcatcgcccgctggagcgatctgcccgccgacagccgacct ctcgtcgatctgctggtcgaggcccgcctgctggtgaaggaccatcgcaacggcgagacc gtggtcgaagtggcgacggaaagcctgctgcgccaatgggatgaactcgccggatggttg cgccaccgggcggaggaactcaaagacgctgacgcactggaacagtcggcgcgctcctgg gagcgcaacgagcacgacgaggcctggctgctcgaaggcaccagactcgtcgaagccgaa tcactggtgaccgagcccggctttcgagagcggctggaaccggttcgcgcctatatcacc gcgtctcgggcgcgggagaacgaacgcgccgaggccgagaagcgccggcagcacaaagaa ctgcatgtcgccaaggaacgccagcaggcggcggaagcgctcgcggcggcggcggcgcgt gccgagctgaaggcgcaggaacacgccgccgccatccggacacagtcacgcggactgctg gtgctggcggcggtttcactggtgatcaccctggtcgcggtggtcggcttcgtgcaggcg cgcgaggcgagaaacgatgtgcgggagcgcgcccgggaaggtctcgcgctgcagctcatc gcggagagcaaggccatggccagcggcctgcaaggcggtggatccgtactcgcgatgcaa ctgacccttgccgcactcgagctctcggagaacgagcgcgtccgtaccgccgcggtcgat ctgctgtacgcgaacccggatcttcgatgggtgaacgaactggagccgatccacaccgtg ggattcagccccgacggcacccgtgtccgggcgggcaccaccggcggcgcggtccacagc ttcgacgcacgaaccggtcgcgacgccggtgcgccgacggtcgacgcacagctcctgacg cgcgccctcagccccgacggcagccgggtcgcggtgtgggacaatgggtttcgagtgctc gacattcgtacgggacagaccctgtatcgagccccggacggcgagggatgggtcccggcc gccaccttcagcccggacggccgacgcatcgcctacgccgaccagaaccggacgattcag gtggtggatatcgaaacaggcgtcgtggtggccgaacctccgacggattcgcaccctgcg ctgtccgccctggcgttcagcccggacggccgcctacttgccgtcgtgggcggcacggcg tacgtgtgggagatcgattccggcgaggtgatcaccggagcgctcgtcgaggacttcacc gccgtggcgttcgctcctgacggacgacgaatcgccaccggcgatcaggatggttcggtt cgggtgtgggatatcaccgaggatgaactgaccggtacggggatccacggccataccggc cgtgtcgatgccctcgcgttcggtccggacgggacgatgctggcatccggcgacgaggac gggacggttcgcgcatggcagatcgtcccgagcgatgacggacgatcgagcgtgatctac aaggccgcgggtccgctgaccggtcatgtcggcccggtgcaggcggtcgggttcagtcct gacggccgcggcatcgtatccggtggcagcgacggaacggtccgcgtctgggagccaccg ctgggtcggttccggatcgacgaccccggctttctcgaacgctatatccaggcagtggct ttcagcccggacgggtcacgtatgaccgcggcttatgcgagtggggcggtgcgtgtgtgg gatgtgcgcaacggccatgccgcgagcacacccttggacacgcgagtcgacgtccccgat gagcttcagggctcgataaccgtgacactcgatgccgacggcagtcgaatggctatggtg cccgaggacggggccgtgtacatctggaacgtcgacacgggaaccctgatcgcggggccg gtgcgagtgcccggagaccggctgcgagctgtcgcattcgattccgccgaccggctggtg gccacggtcgagacggggaatgcggtccaggttgtcgcggtcgagtcaggccaggtgatc ggcgatccgatgaccgaacgcgcccgtgatttcaccacaacgtatctgagtccgggtggc agttggctcgccaccgccgacagcgacggtcgcgtccgaatctgggatgtcgagagcggt cgcagtcggggacggccgatcacgccggagccgcgactgggcacgctcgccgtgagcgcg gacggtgagcgcgttgccaccggtgggagcgacggccgggtgtggatctggcaggtggag accggtgagaccattgccggaccgatgtccggccacctcggcaccgtcgtgaacgccgca ttcagcccggatggcaagtggctggtcacggtcggccaagacggaaccactcggctgtgg gacgctgccacgggaagcgcccggggcagttccaggggtatctcccaattcggcctggat tctctgtcgagcgtcctgaccttccatccggaaggcaagaccttcgtgacctccgatatc gagggggtcgtccgcgaatggccgatattcgaatccgtgacgacggaactctgcggcagg cttaccgcgaacatgagccggaagacctggcgcgaatgggtttccgcggacatcgaatac cgccggctctgccccgccctccccatcgctccggacggcccctga

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