Nocardia otitidiscaviarum: FOH10_02215
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Entry
FOH10_02215 CDS
T06114
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nod03016
]
FOH10_02215
Enzymes [BR:
nod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FOH10_02215
Transfer RNA biogenesis [BR:
nod03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FOH10_02215
Prokaryotic type
FOH10_02215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QDP77735
UniProt:
A0A516NFS0
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All DBs
Position
531911..532828
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AA seq
305 aa
AA seq
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MSQRELVILGTASQVPTKQRNHNGYLLRWDGEGLLFDPGEGTQRQMIYAGLSATDITRIG
ITHFHGDHSLGLAGVVQRISLDRVPHAVDVYYPASGERFYQRLCDSTAYRHHAELRPRPI
AAAGELPAPDAGFTLRTEPLSHPVEAFGYRIDEPDGRRIVPDLLREFGLAGPIVGELQHA
GSIEIDGRTIGLDQVSEPRPGQSFAFVMDTRLCDGVYALAEGVDMLVIEATFLDAEIDLA
EEYGHLTAGQAGKVAAAAGVRTLVLTHFSQRYGTLDDHLDQARAHFDGEIVVATDLARIP
VPPRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcgcgaactggtcattctcggaaccgcgagccaggtgccgaccaagcagcgc
aaccacaacggctacctgctgaggtgggacggcgaggggttgctgttcgatccgggggag
gggacgcagcggcagatgatctacgcggggctgtcggcgaccgacatcacccgcatcggc
atcacgcacttccacggggatcacagtctggggctggcgggtgtcgtgcagcgcatcagc
ctggaccgggtgccgcatgcggtcgacgtgtactacccggcctccggcgaacggttctat
caacggttgtgcgattccaccgcctaccgccaccatgccgaactccgcccgcgccccatt
gccgccgcgggcgaattacccgcccccgacgccggtttcacgctgcgcaccgaaccgctg
tcgcatccggtcgaagccttcggctaccgcatcgacgagcccgacgggcggcgcatcgtc
cccgatctgctgcgtgaattcggcctggccggacccatcgtcggcgagttgcagcatgcc
gggagcatcgagatcgacggccgcacaatcggtctcgaccaggtgagcgaaccgcgtccg
ggccagagcttcgcgttcgtcatggacacccgcctgtgcgacggcgtgtacgccctcgcc
gaaggggtcgacatgctggtcatcgaggccaccttcctcgacgcggagatcgaccttgcc
gaggagtacggccacctcaccgccggtcaggcgggcaaggtggccgccgccgcgggcgtg
cgcaccctggtgctcacccacttctcccagcgctacggcaccctcgacgaccacctcgac
caggcgcgcgcccacttcgacggcgagatcgtggtggcgacggacctggcacggatcccg
gtgccgcccagacgataa
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