Nocardia otitidiscaviarum: FOH10_02575
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Entry
FOH10_02575 CDS
T06114
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_02575
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOH10_02575
Archaeal homologous recombinant proteins
FOH10_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
AAA_22
NET2A
JAKMIP_CC3
DUF1515
TsaE
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QDP77799
UniProt:
A0A516NFW6
LinkDB
All DBs
Position
604328..607642
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AA seq
1104 aa
AA seq
DB search
MRLHRLELTAFGPFAETTVVDFDVLGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPGAR
GESKRLHSDHADEQTPPRVVLEATLGGRRLRLTRSPEFQRPKKRGTGWVTAQASATLEWL
DGRGLNLSRIPDIGDEVVRLLGMSADQFFQVVLLPQGDFARFLRADNEDREKLLEKLFDT
ERFGTAEQWLIDKRRASAAELDTRRQSIDRLIARIGGAAGLPATETVGPLEAVEWSQDLL
ATARAALTATATDLERGEAAATLARRTAEDQRRLHDLHRRLTAARDRLDRYAAGADRRTQ
AQAELDRARRAEPVAAALSDARAAAVALRRREEATGRAAEELAARLIEPGSLELPGTYWA
AADLMRGELSGTDFADDLAMIEPMAEGGVGDSEPLAPGAGDSEPVAGTSGEGSASPSDGP
GPLDQAGSPGRANVAEYGGMRGQSETAGDTRTGLESAIARWTAQIGALDEVRADAETARR
LAGEMTRLRREQEELAGQAEKLRRLRAELPESIASVERRLRTAADAAAGLPVLEADCERL
RTAASAALELATRRGELARAQAAFESARSAHLDAREHTLALRERRLAGMAAELAEALAEG
QPCTVCGSTDHPDPARASGAPVSKDAEDKALQAERVAEAARERAQRQVADLERAIEVLVE
RGGDADKAELAGALNAATERYESARRLAERVETLTAELTRLRSDEARLQDELRDCETRTG
ATTERIVATDRRLAELTERLRTAAGADGTVERRRARLRNLVDDATAVRSARAEAASARDQ
VAAAALRVETLSRDAGLVESVVPVMRADGSGPDYSVLADYARVVDAAARTAQQQADLEDE
LVAADRARASAESVLAEPEVRAAATAALGDLEQLEEAAAQAQSQLKDAVAAHADATRRVE
QLEELCGQLWAAVDRIAPLQCAHEELSGLADVVAGRGENNRKMSLRSYVLAARLEEVALA
GSVRLRRMSGGRYEFVHSDAAGPRGRRGGLGLDIRDDYTGAIRPAKTLSGGETFMASLSL
ALGLADVVAAESGGLVLDTLFIDEGFGSLDADTLDAVMGVLDELRSGGRVVGVVSHVDEM
RQRIPSRLHVVRGRTGSYLETNVA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccgcttggagttgaccgccttcggtccgttcgcggagaccaccgtggtc
gatttcgatgtgctcggggccgatgggctcttcctgctgcacgggcagacgggggcgggt
aagaccacggtgctcgacgccatcgcgttcgcgctgtacggccgggtgccgggggcgcgg
ggggagagcaaacggctgcattccgatcacgccgacgagcagactccgccgcgagtggtg
ctggaggcgaccctcggcgggcggcggctgcggctgacccggtcgccggagttccagcgg
cccaagaaacggggcaccggctgggtcaccgcacaggccagtgccactctggagtggctg
gacgggcgcgggctgaacctgtcccgcatcccggatatcggcgacgaggtcgtgcgcctg
ctcggtatgagcgccgaccagttcttccaggtggtcctgctgccacagggcgatttcgcg
cgtttcctgcgcgccgacaacgaggatcgcgagaagctgctcgaaaagctcttcgacacc
gaacgtttcggcaccgccgaacagtggctcatcgacaagcgccgcgcctccgccgccgag
ctcgacacccgccgccagagcatcgaccggctgatcgcgcggatcggcggcgcggcgggc
ctgcccgccaccgagaccgtcggacccctcgaagccgtcgaatggtctcaggacctgctg
gccaccgcccgcgccgccctcaccgccaccgccaccgacctcgaacgcggcgaggcggcc
gcgaccctggcccgccggaccgccgaggaccagcgccgcctgcacgacctgcaccgccgc
ctgacggccgcccgcgaccggctcgaccggtacgccgccggagccgatcgccgcacgcag
gcacaggccgaactcgaccgggcccgccgcgccgaaccggtcgcggccgccctctccgac
gcccgcgccgccgccgtcgccctgcgccgccgcgaggaggccaccggccgcgccgccgaa
gaactggccgcccgcctcatcgaacccgggagcctggagttgcccggaacttactgggcg
gcagccgatctcatgcgcggagagctgtccggaaccgatttcgccgatgacctcgccatg
atcgaacccatggccgaggggggcgtcggcgactcggaaccgctcgcaccgggtgccggc
gactccgaaccggtcgcgggcacatcgggcgaaggaagcgcgtcaccgagcgatggcccc
gggccgctcgaccaggctggttcgccggggcgcgcgaacgtggccgaatacggggggatg
cgagggcagtccgaaacggccggagacaccaggactgggctggagtcggccattgcgcgc
tggaccgcgcagatcggcgcgctggacgaggtgcgggcggatgcggagacggccaggcgg
ctggcgggggagatgacgcggctgcggcgggagcaggaggaactggcggggcaggcggag
aagctgcggcggctgcgggccgagctgccggagtcgatcgcgtcggtggagaggcggttg
cgtacggcggccgatgcggcggccgggctgccggtgctggaggccgactgtgagcggttg
cgcaccgccgccagcgcggcactcgaattggccacgcggcgtggggaactggcccgtgcg
caggcggcgttcgaatctgcgcgcagcgcgcacctggatgcccgtgaacacaccctggcc
ctgcgtgagcggcgtctggcggggatggcggccgagctggcggaggcactggccgagggg
cagccgtgcaccgtgtgcggctccacggaccaccccgatcccgcccgcgcatcgggcgcg
ccggtgtcgaaggatgccgaggacaaggcattgcaggccgaacgggtggccgaggcggcg
cgcgagcgggcgcagcggcaggtcgccgacttggagcgcgccatcgaggtgctggtggag
cgcggcggcgacgccgacaaggccgaactggccggtgccctgaacgccgccaccgaacgg
tacgagtccgcgcggcggctggccgaacgcgtcgagacgctgacggccgagctgacgcgg
ctgcgcagcgatgaggcccgcctccaggacgagttgcgggactgcgaaacccgcaccggt
gcgacgacggagcggatcgtggccaccgaccgtcgcctcgccgaactcaccgaacgcctg
cgcaccgccgccggtgcggacggcaccgtggagcgccgccgcgcccgtctgcgcaacctc
gtcgacgacgccaccgccgtgcggtccgcgcgcgcggaggcggcgtcggcccgcgatcag
gtcgcggcagcggcgctgcgcgtcgaaactctctcccgcgacgccggtttggtggagtcg
gttgttccggtcatgcgcgccgacggcagcggccccgactacagcgtgctcgccgactac
gcccgcgtggtggacgccgccgcccgcaccgcacagcagcaggccgacctcgaggacgaa
ctcgtcgcggccgaccgcgctcgcgccagcgccgaatcggtgctcgccgaaccggaggtc
cgcgccgccgcgaccgccgcgttgggcgatctcgagcagttggaagaggccgcggcacag
gcacagtcgcagctcaaggacgccgtggccgcacacgcggacgccacccggcgggtcgaa
cagctcgaggaactgtgcggccagctctgggcggccgtggaccggatcgccccgttacag
tgcgcccacgaggagctctcgggcctggccgatgtggtggcgggtcgcggggagaacaac
cgcaagatgtcgctgcgctcctatgtgctcgccgcccggctcgaggaggtggcgctcgcc
ggttccgtgcggctgcgccgaatgtccgggggccgttacgaattcgtccactccgatgcc
gccggtccgcgtggccgccgtggcggtctgggcctggacatccgcgacgactacaccgga
gccatccgccccgccaaaaccctctccggcggtgagaccttcatggcctcgctgtccctg
gcgctgggcctcgccgatgtggtggccgccgaatccggcggtctggtcctcgacaccctt
ttcatcgacgagggtttcggcagcctggacgccgacaccctggacgccgtcatgggcgtg
ctcgacgagctccgctccggcggccgcgtggtcggcgtggtcagccacgtcgacgaaatg
cgccagcgcatccccagccgcctgcacgtggtccgcggccgcaccggctcgtacctggaa
accaacgtggcataa
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