Nocardia otitidiscaviarum: FOH10_04150
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Entry
FOH10_04150 CDS
T06114
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod03420
Nucleotide excision repair
nod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOH10_04150
03430 Mismatch repair
FOH10_04150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_04150
Enzymes [BR:
nod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOH10_04150
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOH10_04150
MMR (mismatch excision repair)
Other MMR factors
FOH10_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDP83194
UniProt:
A0A516NWD6
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All DBs
Position
947818..951345
Genome browser
AA seq
1175 aa
AA seq
DB search
MTPRQLADALGLPPPTDEQAAVIAAPPGPTLVVAGAGAGKTETMAARVVWMVANGLVEPE
QVLGLTFTRKAAQQLTTRIRTRLARLAGAPLVRDIDPTGHLRALLTGSEPEISTYHSYAG
RLLTEHGLLLPVEPNATLLSETQLWQLAYRLVSTWDGDLDIDRTPVSVTEAVLALSGQLA
EHLVRPDQLRDAHRELDRLIHTLPAGPKQRGGPKKALLDLLAVQEERISLLPLVERLAEE
LRRRGALDFGAQMSLAARLAAEHPEVSAAEGERFRLVLLDEYQDTGHSQRILLASLFGGI
GSDHDDDPAGSGRLAVTAVGDPMQSIYGWRGASAANLPRFATDFPCAPGIPAPVLPLLTS
WRNPPEALELANLVADPLRRRAAEGGGVTVDALRPRPDATDGVLAFALTETVADEREWVA
ERIAAEWEAAADLGAQPPISAVLVRRNADAAPLAEALRERGLPVEIVGLGGLLHTPEVAD
VVATLRLIADPSAGSAAIRILTGARWRIGVADIAALFRRARELSIRQPGGQQAAITDTGT
LDDALREVAPEPSEQAGLADAIADPGAAEQYSPQGFARINALGAELTALRERSGQPLPEL
VADVERTIGVGVETQARRAAAGAGAGREHLDAFAEVVSGYAADHRASLTGLLAFLAAAEE
VENGLEPGEVEVARDRVQVLTVHAAKGLEWEVVAVPHVVDGTFPSGTGTTTWMGALAELP
TALRGDRQRDDAGEGVPVLDLTDIHDRADLERALDAHKKALAARRLDEERRLFYVALTRT
ERALFVSAHHWAETGSKPKGPSDFLLDLARAAEQPGTLARAVRIDRWDDPPPPDTPNPFT
DNPPTATWPRDPLGKRRPDIEHAAALVRAALADLRAEPSAGGRGGDGPPHRRADPLADLS
VDVETVAGESDSDDPDPEGWAADVDALLAEHAAATQAAREVELPGQLPATALVDLHADPA
KLAARLRRPLPYPPSPYARRGTAFHAWLQRWFGASRLLGVDELPGASDIGDTDADLVRLQ
EAFLASPWADRNPVEVEVSFETTLAGTVLRGRMDAVFREPDGRWVVVDWKTGAEPKPAEE
AAVAVQLAVYRVAWARLLAQRTGATEAEMLDRIGAAFHYVRTGRTIAPEHLPGPGELAGL
IGAAAPLGPEPDTPEDTDRSPDAPRPDITSRRSDR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atcaccccccggcaactggccgacgcgctgggcctgcccccgcccaccgacgagcaggcc
gccgtgatcgccgccccgcccggcccgaccctggtcgtggcgggggcgggcgcgggcaag
accgaaaccatggccgcccgcgtggtgtggatggtcgccaacggcctggtcgaacccgaa
caggtgctgggcctgaccttcacccgaaaagccgcccagcagttgaccacccgcatccgc
acccgcctggcccggctcgccggagccccgctggtgcgcgatatcgaccccaccgggcac
ctgcgcgccctgctcaccggctccgaaccggagatcagcacctatcactcctacgcgggc
cggttgctcaccgaacacggcctgctgctgccggtggaacccaacgccaccctgctcagc
gagacccagctctggcagctggcctatcggctcgtctcgacctgggacggtgacctcgac
atcgaccgcaccccggtttcggtcaccgaggccgtgctggcgctgtccgggcagctggcc
gagcacctggtgcggccggaccaattgcgggacgcccaccgggaattggaccgcctcatc
cacaccctgcccgcgggtcccaagcagcgcggcggacccaagaaggccctgctggacctg
ctcgccgtgcaggaggagcgcatctcgctgctgcccctggtggaacggctcgccgaggag
ctgcgccgccgcggcgcactggatttcggtgcgcagatgtccctggccgcccggctggcc
gccgagcatccggaggtctcggccgccgaaggtgagcgtttccgcctggtgctgctcgac
gaataccaggacaccggccactcccagcgcattctgctggcctccctcttcggcggcatc
ggatccgatcacgacgacgacccggccgggagcggacggctcgcggtgaccgcggtgggc
gatcccatgcagtcgatctacgggtggcgcggtgcgtcggcggccaacctgccccgcttc
gccaccgacttcccctgtgcgcccggcattcccgcgccggtgctgccgctgctcaccagt
tggcgcaacccgccggaggcgctggaactggccaatctggtggccgatccgctgcggcgg
cgggcggccgagggcgggggcgtcaccgtggacgccctgcgcccgcggcccgacgccacc
gacggcgtgctcgccttcgccctcaccgagacggtcgcggacgaacgggagtgggtggcc
gaacgcatcgcggccgaatgggaggccgccgccgacctgggtgcgcagccgcccatctcg
gcggtgctggtgcgccgcaacgccgacgcggccccgctcgcggaggccctgcgggagcgg
ggattacccgtggagatcgtcgggctgggcgggctgctgcatacgcccgaggtggccgat
gtcgtggccacgctgcggttgatcgccgacccgtcggcgggcagcgcggccatccgcatc
ctcaccggcgcgcgctggcgcatcggcgtcgcggatatcgccgccctgttccggcgtgcc
cgagagctgtccattcgacagcccggcggacagcaggccgccatcaccgacaccgggaca
ctggacgacgcactgcgcgaggtcgcgccggaaccctccgaacaggcgggcctggccgac
gctattgccgatcccggtgcggcggaacagtattcaccgcagggtttcgcgcggatcaat
gccctgggcgcggagctcaccgccctgcgcgagcggagcggacagccgctgccggaactg
gtcgcggatgtggagcgcaccatcggggtgggcgtggagacccaggcccggcgcgccgcc
gccggggcgggcgcgggtcgcgagcatctggacgccttcgccgaggtggtctccggctac
gccgccgaccatcgcgcctcgctgaccggcctgctcgccttcctcgccgccgccgaggag
gtcgagaacggtttggagccgggcgaagtcgaggtcgcccgggaccgggtgcaggtgctc
acggtgcacgccgccaagggcctggaatgggaggtggtggcggtcccgcacgtggtggac
ggcaccttcccgtccggcaccggcaccaccacctggatgggcgcgctcgcggaactcccc
accgcgctgcgcggggaccgccagcgcgacgacgccggtgagggtgtcccggtgctcgac
ctcaccgatatccacgatcgcgccgatctggaacgcgccctggacgcgcacaagaaggca
ctggccgcccgccgcctcgacgaggagcgtcgcctcttctatgtggccctcaccagaacc
gaacgcgccctgttcgtttcggcgcaccactgggccgagaccggctccaagcccaagggc
ccctccgacttcctgctcgacctggcgcgcgccgcggaacagcccggcacgctggcccgc
gccgttcgcatcgaccgctgggacgacccaccaccccccgacacccccaacccgttcacc
gacaacccgcccaccgccacctggccccgcgaccccctcggcaagcgccgccccgatatc
gaacacgccgccgccctggtccgcgcggccctcgccgacttgcgcgcggaaccgagcgcg
ggtgggaggggcggtgacggaccgccgcaccggcgtgccgatccgctcgcggatctgtcc
gtcgacgtcgaaaccgttgcgggcgaatcggactccgacgaccccgatcccgaaggctgg
gcggccgatgtcgacgccctgctcgccgagcacgccgcggccacgcaggccgcccgagag
gtcgagctgccggggcagctgcccgccaccgccctggtcgacctgcatgccgatccggcg
aaactggctgcccggctgcggcgtccgctgccgtatccgcccagtccgtacgctcggcgc
ggcaccgccttccacgcctggctgcaacgctggttcggggcgtcgcgcctgctcggcgtc
gacgaactccccggcgcgtccgacatcggcgacaccgacgccgacctggtccgcctccag
gaggcgttcctcgcctcgccgtgggccgaccgcaatcccgtcgaggtcgaggtgtccttc
gaaacgacactggcgggcaccgtcctgcgcggtcgcatggacgccgtcttccgggaaccg
gacggccgctgggtggtggtcgactggaagaccggcgcggaaccgaaacccgccgaggag
gccgccgtcgccgtgcagctggccgtctaccgcgtggcctgggcgcggctgctcgcccag
cgcaccggcgccaccgaggccgagatgctggaccggatcggagcggccttccactacgtg
cgcaccggccgcaccatcgcccccgaacatctgcccggcccaggcgaattggccgggctc
atcggcgccgccgcaccgctcggccccgagcccgacacaccggaggacacggatcgatct
ccggacgcgccccgtccggacatcacatcccgccgatcggaccggtag
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