Nocardia otitidiscaviarum: FOH10_17985
Help
Entry
FOH10_17985 CDS
T06114
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod00750
Vitamin B6 metabolism
nod01100
Metabolic pathways
nod01240
Biosynthesis of cofactors
Module
nod_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FOH10_17985 (pdxS)
Enzymes [BR:
nod01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FOH10_17985 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
DHO_dh
Glu_synthase
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QDP80324
UniProt:
A0A516NN36
LinkDB
All DBs
Position
complement(4052119..4053036)
Genome browser
AA seq
305 aa
AA seq
DB search
MTQEFAVTTSDTTTIGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVP
ADIRAQGGVSRMSDPDMIDGIINAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTP
ADYSNHIDKFAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRD
EIRRLTSLPEDELYVAAKELQAPYELVREVAQTGKLPVVLFTAGGIATPADAAMMMQLGA
EGVFVGSGIFKSGNPEQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEEIPQPHRL
AERGW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggagtttgccgtgaccacgtccgacaccaccaccatcggcaccgcccgcgtg
aagcgcggcatggccgagatgctgaagggcggtgtgatcatggatgtcgtcacgccggag
caggccaagatcgccgaggacgcgggcgccgtcgccgtcatggcgctcgagcgcgtgccc
gccgatatccgcgcccagggcggtgtctcccgcatgagcgatccggacatgatcgacggc
atcatcaacgccgtttccatcccggtcatggccaaggcccggatcggccacttcgtggag
gcccagatcctgcagtctctcggcgtcgactacatcgacgagtccgaggtgctgaccccg
gcggactactccaaccacatcgacaagttcgccttcaccgtgccgttcgtctgcggtgcg
accaacctgggcgaggcgctgcgccgaatcaccgagggcgcggccatgattcgctccaag
ggtgaggccggcaccggtgacgtctccaacgccaccacccacatgcgcaagatccgcgac
gagatccgccgcctgacctcgctgcccgaggacgagctgtacgtggccgccaaggagctc
caggccccctacgagctggtgcgcgaggtggcccagaccggcaagctgccggtggtgctg
ttcaccgccggtggtatcgccaccccggccgacgccgccatgatgatgcagctcggggcc
gagggcgtcttcgtcggttccggcatcttcaagtccggcaatccggagcagcgcgccgcc
gccatcgtcaaggccaccaccttctacgacgatccggacgtgctcgccaaggtgtcgcgt
ggcctgggtgaggccatggtcggcatcaacgtggaggagatcccgcagccgcaccgcctc
gccgagcgcggctggtaa
DBGET
integrated database retrieval system
