Nocardia otitidiscaviarum: FOH10_19895
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Entry
FOH10_19895 CDS
T06114
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nod03016
]
FOH10_19895 (miaB)
Enzymes [BR:
nod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FOH10_19895 (miaB)
Transfer RNA biogenesis [BR:
nod03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FOH10_19895 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
QDP83624
UniProt:
A0A516NXM5
LinkDB
All DBs
Position
complement(4464033..4465565)
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AA seq
510 aa
AA seq
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MDVDVVRTYEVRTYGCQMNVHDSERLSGLLEDAGYVKATSGDTADLVVFNTCAVRENADN
KLYGTLGHLAPIKAERPGMQIAVGGCLAQKDRDTVVKKAPWVDVVFGTHNIGSLPVLLER
ARHNSEAQVEIMEALEAFPSSLPAKRESAYAGWVSISVGCNNTCTFCIVPSLRGKEVDRR
PGDVLAEVQALVDQGVMEVTLLGQNVNSYGVSFADPNEPRDRGAFAKLLRACGSIEGLER
VRFTSPHPAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRVLKAMRRSYRKSKYLGIIEKV
RAAMPHAAITTDIIVGFPGETEEDFQETLDVVRQARFTSAYTFQYSIRPGTPAAEMPDQL
PKDVVQERYMRLIELQERISLEANQALVGTEVELLVAESSAGKKNAATARMSGRARDGRL
VHFRPPADPAPGTEIRPGDLVTVDITGAAPHHLIADSVVRDHRRTRAGDAHERGVTPKTA
PIGVGLGLPRIGAPEPLPAASSGCDSGCGL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgatgtcgtgcgcacctatgaggtgcgcacctacggctgccagatgaacgtg
cacgactccgagcggctgtccggtctgctcgaggacgccgggtacgtcaaggccacatcc
ggtgacaccgccgatctcgtcgtgttcaacacctgcgcggtgcgcgagaacgccgacaac
aagctgtacggcaccctcggccatctcgcgccgatcaaggccgaacgtccgggcatgcag
atcgccgtcggcggctgcctggcccagaaggaccgcgacaccgtcgtgaagaaggccccc
tgggtggacgtggtgttcggcacccacaacatcggttcgctgccggtgctgctggaacgc
gcccgccacaacagcgaggcgcaggtggagatcatggaggcgctcgaggcgttcccgtcc
tcgctgcccgccaagcgtgaatccgcctacgcgggctgggtgtcgatctcggtgggctgc
aacaacacctgcaccttctgcatcgtgccgtcgctgcgcggcaaggaggtggaccgccgt
cccggcgatgtgctggccgaggtgcaggcgctggtcgaccagggcgtcatggaggtgacg
ctgctggggcagaacgtcaactcctacggcgtctccttcgccgacccgaacgaaccgcgc
gatcgcggcgccttcgccaaactgctgcgcgcctgcggatccatcgagggcctggagcgg
gtgcgcttcacctccccgcatccggccgagttcaccgacgacgtgatcgaggcaatggcc
gagacgccgaacgtgtgcccgcagctgcacatgccgctgcagtccggttccgatcgcgtg
ctcaaggccatgcggcgctcctaccgcaagtccaagtacctgggcatcatcgagaaggtg
cgggcggcgatgccgcacgccgccatcaccaccgacatcatcgtcggcttcccgggcgag
accgaggaggatttccaggagaccctggatgtggtgcggcaggcgcggttcaccagcgcc
tacaccttccagtactccatccgccccggcaccccggccgccgagatgcccgatcagctg
cccaaggacgtggtgcaggaacgctatatgcggctcatcgagttgcaggagcggatttcc
ctggaggccaatcaggcactggtcggcaccgaggtggaactgctggtggccgagagcagc
gcgggcaagaagaacgccgccaccgcgcgcatgagcggtcgcgcccgcgacggccgcctg
gtgcacttccgtccccccgccgatcccgcgcccggaacggagatccgtcccggcgatctg
gtcaccgtcgacatcaccggcgcggctccgcaccacctcatcgccgacagcgtggtccgc
gaccatcgccgcacccgcgcgggcgacgcccacgagcgcggcgtcaccccgaagaccgcg
cccatcggcgtcggcctgggactgccgcgcatcggcgcacccgaaccgctgcccgccgcg
tcgtcgggctgcgacagcggctgcgggctgtga
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