Nocardia otitidiscaviarum: FOH10_21360
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Entry
FOH10_21360 CDS
T06114
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nod03036
]
FOH10_21360 (smc)
Chromosome and associated proteins [BR:
nod03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FOH10_21360 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Transglut_core
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDP80879
UniProt:
A0A516NPS3
LinkDB
All DBs
Position
complement(4776614..4780222)
Genome browser
AA seq
1202 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MQDVIFAGTAGRAPLGRAEVTLTIDNSDGALPIEYSEVSITRRMFRDGAGEYEINGNSCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESRPEDRRAFIEEAAGVLKHRRRKEKAVRK
LDAMQANLARLTDLTTELRRQLKPLGRQAEVARRAATVQSELRDARLRLAADDLVSRRRD
LDGQQSKEAYAREQQINVQAELDAANAALAQQEFELSKLTPGAEAAAQSWFQLSALTERV
NATIRIARDRARNLTIEQPTGSGRDPEQLEREADRVEAEEAELVAAVEMAAETLEAAREQ
LHEREQAAKAAEQAHLAAVRAIADRREGLARLSGQVDSLRIRAQSVDGEIQRLSTAIAEA
RQRGEAADAEFESVQAELSELDAGEEGLDAQYEHAAQALELADQRVTELRERDREAGKRV
ASLAARVEALTMGLQRRDGAAWLLEHRAEGLLGPLSGQLRVDSGFEAAVAAALGPLADAV
TADTGSSAHGAVRALKEADGGRAAVVYSDAAQANSGPSGELPGGARWLLDVIDCPASLRA
AVAALTTGVAVVENLSAARELVVVRPELRVVTRDGDLTGSGWVLGGSDRAPSQLEVQAEI
DAAQQELASWQRQSEEFEAALAGALAEQADRKEAVDHALLALHESDQALVSIYDRLGRLG
QTARAAQKDCERLLAQRDDTEAGRAETLEKLAELEDRLRHAELEQSDMDPEAAGTETAGY
AREEAAAALAEARSMEVEARLAVRTAEERAESVRGKADSLRRAARAERENRARAERAQAA
RRQAAAVAAVVADSAERVAAELEQVVAQAGARRDDLVRRRTECAAQVDQTKERARALTTQ
LAQLTDAVHRDEVARAQAALRIEQLETTISEQFGIALDDLIDEYGPDVPMPPTALEMMEY
EQAKERGEAVSPPQPMPYDRATQERRAKRAEKDLTTLGKVNPLALEEFAALEERYNFLAT
QLEDVKKARQDLLDVVAEVDARILQVFTEAYEDVAREFVGVFSRLFPGGEGRLLLTDPSD
MLATGVEVEARPPGKKVKRLSLLSGGEKSLTAVALLVAIFRARPSPFYVMDEVEAALDDT
NLRRLIGLFEQLREKSQLIVITHQKPTMEIADALYGVSMRGDGITQVISQRMRGENLVGA
TT
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaagagtctgacgctgaagggcttcaaatccttcgcgtccgcgacgacgctc
cggttcgaaccgggtatcacctgcgtggtggggccgaacgggtcggggaaatcgaatgtc
gtcgatgcgctcacctgggtgatgggtgagcagggggcgaaggcgctgcgcggcgggaag
atgcaggacgtcatcttcgccgggacggcgggtcgcgccccgctgggtcgtgccgaggtc
acactcaccatcgacaactccgacggggcgctgcccatcgaatactccgaggtctccatc
acccgccgcatgttccgcgacggcgcgggcgagtacgagatcaacggcaactcctgccgc
ctcatggatgtgcaggaactgctcagcgactccggcatcggccgcgagatgcacgtcatc
gtcgggcaggggcagctgtcggccatcctggaatcgcggccggaggatcggcgcgccttc
atcgaggaggccgcgggcgtgttgaagcatcgccgccgcaaggagaaggcggtgcgcaag
ctcgatgccatgcaggccaatctggcccgcctcaccgacctcaccaccgaactgcgccgc
cagctcaaaccgctcgggcggcaggccgaggtcgcgcggcgggcggcgaccgtgcaatcc
gagctgcgggacgcgcggctgcgactggccgccgacgatctggtgtcgcgccgccgcgac
ctggacgggcagcagagcaaggaagcgtacgcgcgcgaacagcagatcaacgtgcaagcc
gaactcgacgccgccaatgcggcgctcgcgcagcaggagttcgagctgtccaagctcacc
ccgggcgcggaggcggcggcgcagagctggttccagctctcggcactgaccgagcgggtc
aacgccaccatccgcatcgcccgcgaccgggcccgcaacctcaccatcgaacagcccacc
ggcagcgggcgcgaccccgaacagctggagcgcgaagcggatcgggtggaggccgaagag
gccgagctggtcgcggccgtcgagatggccgcggaaacgctggaagctgcccgggaacag
ctgcacgaacgggagcaggccgccaaggccgccgagcaggcgcatctggccgccgtgcgc
gccatcgccgaccggcgcgagggtctcgcccgcctgtccgggcaggtggactcgctgcgg
attcgcgcccagtcggtggacggcgagatccagcgcctctcgaccgccatcgccgaggca
cggcagcgcggcgaggccgccgacgccgaattcgagtccgtccaagccgaattgagcgaa
ctcgatgcgggcgaggaagggctcgacgcacagtacgagcatgccgcgcaggccctcgag
ctggccgaccagcgggtcaccgaactgcgtgagcgcgaccgcgaggcgggcaagcgggtc
gcctcgctcgctgcccgcgtcgaggcgctgaccatgggtttgcagcgccgcgacggtgcc
gcctggctgctcgaacaccgtgccgagggactgctcgggccgctgtccgggcagttgcgg
gtggacagcggtttcgaagcggccgtggccgccgcgctcgggccgctcgccgacgccgtc
accgccgacaccggatcctccgcccacggtgcggtgcgagcgctcaaggaggccgacggt
ggccgcgccgctgtggtctactccgatgccgcacaggcgaattcggggccgagcggggaa
ctgcccggtggcgcgcgctggttgctggacgtgatcgactgccccgcatccctgcgcgcc
gcggtcgccgccctcaccacgggcgtcgccgttgtcgagaacctctccgccgcaagggaa
ctcgtcgtggttcggcccgagctgcgggtcgtgacccgcgacggtgatctcaccggctcc
ggctgggtgctcggcggctccgaccgtgcccccagccagctcgaggtgcaggccgagatc
gatgccgcccagcaggaattggcgtcttggcagcgacagtccgaggagttcgaggcggcc
ctggcgggagcgctggccgagcaggctgaccgcaaggaggccgtcgaccacgccctgctc
gccctgcacgaatccgatcaggcgctggtctccatctacgaccggctcggccgcctcggc
cagaccgcccgcgccgcccagaaggactgcgaacgtctgctcgcccaacgtgacgacacc
gaggcgggccgcgcggaaaccctggagaagctggccgaactcgaggaccggctgcgccac
gccgaactcgagcagtccgatatggatcccgaggccgcgggcaccgagaccgccggttac
gcccgcgaggaggccgccgccgcactggccgaggcccgctccatggaggtggaggcccgg
ctcgccgtgcgcaccgccgaggaacgcgccgaatccgtacgcggcaaagcggattcgctg
cgccgcgccgcccgcgccgaacgggagaaccgggcccgcgccgaacgtgcccaggccgcc
cgccgtcaggccgccgcggtggccgccgtggtcgccgactcggccgaacgcgtggccgcc
gaactggaacaggtcgtcgcccaggccggtgcccgccgcgacgacctggtgcgtcgtcgc
accgaatgcgccgcgcaggtggatcagaccaaggagcgcgcgcgcgccctcaccacccag
ctcgcccagctcaccgatgccgtacaccgcgacgaggtggcgcgcgcccaggcggcgctg
cgcatcgaacagttggagaccaccatctccgagcagttcggcatcgccctcgacgacctc
atcgacgagtacggcccggatgtgcccatgccgccgaccgcactggagatgatggagtac
gagcaggccaaggagcgcggggaggcggtcagcccgccgcagcccatgccctacgaccgg
gccacccaggagcgccgcgccaagcgcgccgagaaggacctcaccaccctcggcaaggtg
aatccccttgcgctggaggagttcgcggccctggaggagcgctacaacttcctcgccacc
cagctcgaggatgtcaagaaggcccgccaggacctgctcgacgtggtcgccgaggtggat
gcccgcatcctgcaggtcttcaccgaagcctacgaggacgtggcgcgcgaattcgtcggc
gtcttcagccgcctgttccccggcggcgagggccgcctgctgctcaccgacccctccgac
atgctcgccaccggcgtcgaggtggaggcccgcccgccgggcaagaaggtcaagcggctg
tccctgctctccggcggcgagaagtccctcaccgcggttgccctgctggtcgccatcttc
cgcgcccgcccctccccgttctacgtcatggacgaggtcgaagcggcgctcgacgacacc
aacctgcgccgcctcatcggcctgttcgaacagctccgcgagaagtcccagctcatcgtc
atcacccaccagaagcccacgatggagatcgccgacgccctctacggcgtgagcatgcgc
ggcgacggcatcacccaggtgatctcccagcgcatgcgcggggagaatctggtgggcgcg
acgacctga
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