Nocardia otitidiscaviarum: FOH10_25535 Help Entry FOH10_25535       CDS       T06114                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism nod  Nocardia otitidiscaviarum Brite KEGG Orthology (KO) [BR:nod00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nod03400]     FOH10_25535 Enzymes [BR:nod01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      FOH10_25535     5.6.2.6  RNA 3'-5' helicase      FOH10_25535 DNA repair and recombination proteins [BR:nod03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     FOH10_25535 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD Helicase_C ResIII AAA_25 DUF6406 Lhr_WH PhoH AAA_22 Motif Other DBs NCBI-ProteinID:  QDP81586 UniProt:  A0A516NRP1 LinkDB All DBs Position 5680202..5684896 Genome browser AA seq 1564 aa AA seqDB search MDRFSPATRQWFDGAFPAPTAAQLGAWEAISAGEHTLVVAPTGSGKTLSAFLWAIDRLAA REPAEGPRTTSVLYISPLKALAVDVERNLRAPLVGVTQTAKRLGSKPPEIRVGVRSGDTS AADRRSMQRTPPDILITTPESLFLMLTSAARETLRGVHTVIVDEVHAIAGSKRGAHLALS LARLDLLTERPAQRIGLSATVRPPAEVGRFLVGDAPITIVSPPAPKTFDLTVRVPVADMT EPDESGEAASIWPHVDEAIVDLVLEHRSSIVFANSRRLSERLTARLNEAYAARLGETVDT EHAPPAQLGPSTEVVHGAAPLLARAHHGSVSKEQRALIEDDLKSGRLRCVVATSSLELGI DMGAVELVVQVEAPPSVASGLQRVGRAGHQVGEISRGVIFPKHRTDVIHCAVASMRMTAG QIEELKIPAHPLDILAQQTVAACALEPLDADAWFEVVRSTGSYAALPRSAYESVLDLLSG RYPSDEFAELRPRIVWDRDAGTLTGRPGAQRLAVTSGGAIPDRGLFPVFMVGEKASRVGE LDEEMVYESRVGDVFALGATSWRIEEITFDRVLVTPAFGLPGRLPFWHGDSLGRPAELGA ALGEFVRRAGQAVERSASRRGASTRPPTNASDSAHSPSRASGTSSTATASNRSTATHTEV PAGSSELSLPAVSAAAGLDENATANLVALLEEQRAATGQLPTDKTLLVERFRDELGDWRL VLHSPYGLPVHAPWALAVGARLRERFGVDAAPTPSDDGIVVRLPDTTDEPPGAELFVFEP DEIDDVVTEQVGGSALFASRFRECSARALLLPRRDPGKRAPLWQQRQRAAQLLDVARKFP DFPMLLETVRECLQDVYDLPSLRDLLSRVARRQLRLVEVETATPSPFANSLLFDYIGQFM YEGDSPLAERRAAALSLDSSLLAELLGRVELRELLDAAVLELTERELQRLTPERHARDLE GLADLLRLLGPLTAEEAALRCVADPREWFAELVKTHRALEVSFAGSSWWVAVEDAARLRD ALGVPLPIGVPAAFVEPVADPLGDLVGRYARTHGPFTLDAVAHRFGLGSAVAATALHRLA LEKRVVEGEFTPGTAGAEWCDSQVLRRLRRRSLAAARKEVEPVATAALGRFLPAWQHVGT GELRGVDGVAAVVEQLAGVPIPASAWESLVLPSRVRDYTPAMLDELLATGEVLWSGHGAI TAKDGWIALHPADQAPLTLPPPDELELGEVHISLLTAMGATVIGAATAPGTGESATAQVV PSSGGAYFFRQLAEATGTEDETPVVTALWELVWAGHVGGDTFAPVRALLSGTTRTTTAHR TPRRAPRGRMYLPRAGAPTRTSPPQVAGRWSPLPERVADNTIRAHATADVLLERYGVLTR GAVQSEGVPGGFALMYRVLTEFEDRGRCRRGYFVDSLGGAQFSTTDVVDRLRSYETEAAG SALALAACDPANPYGAALPWPKAAAEGAGHRPGRKAGALVVLVEGELALYLERGGKTLLT FTEDPAVRTAAAGALAGLVHARRVDSLVIDRVNGESVHGNTFADFLTSAGFAPTPRGFRL RSRP NT seq 4695 nt NT seq  +upstreamnt  +downstreamnt atggatcggttctcccccgccacccggcagtggttcgacggcgcgttccccgcgccgacg gccgcgcagttgggggcctgggaggccatttccgccggggaacacacgctcgtcgtcgcg ccgaccgggtcgggcaaaacgctgtcggcgttcctgtgggccatcgaccggctggccgca cgcgaacccgcggaggggccgcgcaccacctcggtgctgtacatctcgccgctgaaggcg ctggccgtggacgtggagcggaatctgcgcgcgccgctggtgggggtgacgcagacggcc aagcggttggggtcgaagccgccggagatccgggtgggggtgcgatcgggggataccagc gccgcggatcggcggtccatgcagcgcacgccgcccgacatcctcatcaccacgcccgag tcgctgttcctcatgctcacctcggcggcgcgcgagacgctgcgcggggtgcacaccgtg atcgtggacgaggtgcatgccattgccgggtccaaacgcggtgcgcaccttgcactttca ctggcccgactggatttgctgaccgaacgcccggcacagcggatcgggctgtcggccacg gtgcgcccgcccgccgaggtgggacggttcctggtgggcgatgccccgatcaccatcgtg tcaccgcccgcacccaagaccttcgacctcaccgtgcgggtgccggtggcggatatgacc gaaccggacgagtccggggaggccgcctccatctggccgcacgtggacgaggccatcgtg gacctggtgctcgaacaccggtcctccatcgtgttcgccaattcgcggcggctctcggaa cggctcaccgcccggctgaacgaggcgtacgcggcccggctcggggagacggtggatacc gagcacgcgccgcccgcccagctgggtccgtcgaccgaggtggtgcacggcgccgcgccg ctgctggcgcgggcgcaccacggctcggtgagcaaggagcagcgggcgctcatcgaggac gacctcaagagcgggcggctgcgctgcgtggtggccaccagcagtctggaactcggcatc gatatgggtgcggtggaattggtggtgcaggtcgaggcaccgccctcggtggcgagcggg ctgcaacgcgtcggacgagccggacaccaggtgggcgagatctcgcgcggcgtgatcttc cccaagcaccgcaccgacgtcatccactgcgcggtggcgtcgatgcgcatgaccgccggg cagatcgaggagctgaagattccggcgcaccccctggacatcctcgcccagcagaccgtg gcggcgtgcgcgctggaaccactggacgccgatgcctggttcgaggtggtgcggagtacg ggaagctatgcggcactgccgcgttcggcctacgaatcggtgctggatctgctgtccggg cggtatccgtccgacgagttcgccgaactgcggccgcgcatcgtgtgggatcgcgacgcc gggacgctcaccggacggccgggggcgcagcgactggcggtcacctccggcggggccatt ccggatcgcggcctgttcccggtgttcatggtgggcgagaaggcgtcgcgcgtcggcgaa ctcgacgaggagatggtgtacgaatcccgcgtcggggatgtgttcgcgctcggggccacc agctggcgcatcgaggagatcaccttcgaccgggtgctggtcaccccggcgttcgggctg ccggggcgactgcccttctggcacggtgactcgctgggccgcccggccgaattgggtgct gcgctgggcgaattcgtgcgccgcgccgggcaggcggtcgagcggtcggcgagtcgacgc ggagcgagcacccggccacccacgaacgcgtccgacagcgcacacagcccatcgcgcgcg tccgggacttcctcgaccgccacggcgtcgaaccggagcaccgcgacgcacaccgaggtg cctgcgggcagctcggagctgagtctgcccgcggtgtcggcggctgcggggctggacgag aacgccacggcgaatctcgttgcgctgctggaggagcagcgggcggcgaccggacagctg ccgacggacaagacgctgctggtggagcggttccgggacgaattgggtgactggcggctg gtgctgcattcgccgtacgggctgccggtgcacgcgccgtgggcgctggcggtgggggcg cggctgcgggaacgattcggggtggatgccgcgccgacaccgtcggatgacgggatcgtg gtgcggctgccggacaccaccgacgagccacccggggccgagctgttcgtcttcgaaccg gatgagatcgacgatgtggtgaccgagcaggtgggcggctcggcgctgttcgcctcacga ttccgggagtgttcggcgcgggcactgctactgccgcgccgcgatccgggcaaacgggct ccgctgtggcagcaacggcagcgggccgcgcaactgctcgatgtggcgcgcaagttcccg gacttccccatgctgctggagacggtgcgcgaatgcctccaggacgtgtacgacctgccc tcgctgcgcgatctgctgagccgggtggcgcggcggcagctgcggctggtcgaggtggag accgccacgccgtcgcccttcgcgaattcgctgctgttcgactacatcggccagttcatg tacgagggcgacagtcccctcgccgagcggcgggcggcggcgctgtcgctggactccagc ctgctcgcggaactgctgggccgggtggaactgcgcgaactgctcgacgcggcggtactc gagctgaccgagcgggagttgcagcggctcaccccggagcggcacgcccgggatctggag gggctggccgatctgctgcgactgctcgggccgctcaccgccgaggaggcggcgctgcgc tgtgtcgcggacccgcgtgagtggttcgcggagttggtgaaaacccatcgggcgctggag gtctccttcgcgggatcgagctggtgggtggcggtggaggatgccgctcgactgcgggac gcgctcggcgtgccactgcccatcggcgttccggcggcattcgtggaaccggtggccgat ccgctcggcgatctcgtcggccgctacgcccgcacccacggaccgttcaccctggacgcg gtggcgcaccgcttcgggctcggctcggccgtggctgctaccgccctgcaccgcctcgcg ctcgaaaagcgagtggtggaaggcgaattcacgcccggaacggcgggcgccgaatggtgc gacagccaggtgcttcgccgactgcgccgccgctcgctcgccgccgcccgcaaggaggtg gagccggtcgccaccgccgccctcggacgattcctgcccgcctggcagcatgtcggcacc ggggaactgcgcggcgtggacggtgtcgccgccgtggtggaacagcttgcgggcgtgccc attccggcctcggcctgggaatcgctcgtgctgccgtcgcgggtgcgcgactacaccccc gccatgctggacgaactcctggccaccggcgaggtgctctggtccggccatggcgcgatc accgccaaggacggctggatcgccctgcatccggccgaccaagcgcccctcaccctgccg ccgcccgacgaactggaactcggcgaggtacacatcagcctgctgaccgccatgggcgcg accgtgatcggcgcggccaccgccccgggtacgggcgaatccgcgaccgcccaggtggtg ccgagttccggtggggcgtacttcttccggcagttggcggaggccaccggcaccgaggac gagaccccggtcgtgaccgccctgtgggagctggtgtgggcgggccacgtgggcggtgac accttcgcccccgtgcgcgcgctgctctccggcaccacccgcaccaccaccgcccaccgc actccgcgccgcgccccgcgcggacgcatgtacctcccccgcgcgggcgcaccgacccgc accagcccgccgcaggtggccggacgctggtctccgcttccggagcgggtggcggacaat acgattcgcgcgcacgccaccgccgacgtgctactggaacgctacggcgtactcacccgc ggcgcggtccagagcgagggcgtacccggcggcttcgccctcatgtaccgggtgctcacc gagttcgaggaccgcggccgctgccgccgcggctacttcgtggattccctgggcggcgcg cagttctcgaccacggatgtggtggaccggctgcgctcctacgaaaccgaggcagccggt tccgctctcgcgctggccgcctgcgatccggcgaatccgtacggggcggcgctgccgtgg cccaaggcggcggccgagggggcggggcatcggccgggacgcaaggccggtgcgctggtg gtgctggtggagggcgagctggcgctgtatctggagcgtggcggcaagacgctgctgacc ttcaccgaggatccggcggtgcgcacggccgccgccggtgccctggccggactggtgcac gcccggcgcgtggattcgctggtcatcgaccgggtgaacggggaatccgtgcacggcaac accttcgccgacttcctgacctcggcgggcttcgcccccaccccgcgcggtttccgacta cggagccgtccgtga

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