Nocardia otitidiscaviarum: FOH10_26475
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Entry
FOH10_26475 CDS
T06114
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOH10_26475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nod03021
]
FOH10_26475
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_26475
Enzymes [BR:
nod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOH10_26475
Transcription machinery [BR:
nod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOH10_26475
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOH10_26475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QDP81741
UniProt:
A0A378YIZ2
LinkDB
All DBs
Position
complement(5880827..5881885)
Genome browser
AA seq
352 aa
AA seq
DB search
MLISQRPTLTEEVVSENRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLILDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHSLGLSLKDSPASFDPSSVVGYDAASGTWSDSGSFSDTDSGEQDYAETEQL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcacagcgaccgacgctgaccgaagaggtcgtttccgagaatcgctcccgg
ttcaccatcgaaccgctggagccgggcttcggctacaccctcggcaactcgctgcgccgc
accctgctctcgagcatcccgggtgccgcggtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccacggttccgggcgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtggtgtcgtccgaagaggacgagccggtcaccatgtacgtgcgcaagcag
ggcccgggcaccgtcaccgccggtgacatcgtgccgccggccggtgtgaccgtccacaac
ccggacatgcacatcgccaccctgaacgacaagggcaagctggagatcgagctcgtggtc
gagcgcggtcgcggctacgtccctgccgtgcagaacaaggcctcgggcgcggaaatcggc
cggattccggtggattcgatctactccccggtcctgaaggtgacctacaaggtcgaggcg
actcgtgtcgagcagcgcaccgacttcgaccggctcatcctggatgtcgagaccaagaac
tcgatctccgcgcgggatgcgctggcgtcggccggtaagaccctggtcgagctgttcggt
ctggctcgtgagctcaacgtcgaggcggaaggcatcgagatcgggcccagcccggccgag
gccgaccacatcgcgtccttcgggctgccgatcgaggatctggatctgaccgtgcggtcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggttgcccgcaccgag
tccgatctgctggacatccgcaacttcggacagaagtccatcgacgaggtcaaggtcaag
ctgcattcgctgggcctctcgctgaaggactccccggcctccttcgatccgtccagcgtc
gtcggctacgacgccgccagcggcacctggagcgacagcggctcgttcagcgacaccgac
agcggcgagcaggactacgccgaaaccgaacagctctaa
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