Nocardia otitidiscaviarum: FOH10_30470
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Entry
FOH10_30470 CDS
T06114
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_30470
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FOH10_30470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QDP82411
UniProt:
A0A516NU73
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All DBs
Position
6774122..6774556
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AA seq
144 aa
AA seq
DB search
MSEGARATGRPRTDAATSARMARQRRVGTAPEVALRRELHRRGARFFVDRAPVRGLRRRA
DIVFPRRRVAVYVDGCFWHSCPEHATFPKNNAEWWAEKLAGNVARDRDTDARLREAGWTV
VRVWEHERAESAADLVWKALGRTE
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggagcgcgggcgacgggacggccgcggacggatgcggctacgagtgcgcgg
atggcgcggcagcggcgcgtggggaccgcgccggaggtcgcgctgcggcgggaactgcat
cggcggggggcgcggttcttcgtggatcgggctccggtgcgggggctgcggcggcgggcc
gacatcgtgttcccgcgccgcagggtggcggtgtacgtggacggctgcttctggcacagc
tgtcccgagcacgccacctttcccaagaacaatgccgaatggtgggccgagaagctggcg
ggcaatgtggcgcgcgaccgcgataccgacgcgcggttgcgggaggcggggtggacggtc
gttcgggtgtgggagcacgagcgagccgagagcgcggctgatctggtgtggaaggcgttg
gggcgcacggagtga
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